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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, endoplasmic reticulum, vacuole

Predictor Summary:
  • mitochondrion 1
  • endoplasmic reticulum 3
  • extracellular 2
  • golgi 2
  • plasma membrane 3
  • vacuole 3
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:secretory
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G340600.1
TraesCS1D01G342600.1
TraesCS2A01G368500.1
TraesCS2B01G385700.2
TraesCS2D01G365300.2
TraesCS3A01G274800.1
TraesCS3A01G313000.1
TraesCS3B01G158900.1
TraesCS3B01G308400.1
TraesCS3D01G141300.1
TraesCS3D01G274500.1
TraesCS6A01G237600.1
TraesCS6B01G266100.1
TraesCS6D01G220300.1
TraesCS7A01G300700.1
TraesCS7D01G296400.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G17340.1 TraesCS1A01G340600.1 AT3G16310.1 21798944
AT4G17340.1 TraesCS1D01G342600.1 AT3G16310.1 21798944
AT4G17340.1 TraesCS3A01G274800.1 AT3G16310.1 21798944
AT4G17340.1 TraesCS3A01G313000.1 AT3G16310.1 21798944
AT4G17340.1 TraesCS3B01G158900.1 AT3G16310.1 21798944
AT4G17340.1 TraesCS3B01G308400.1 AT3G16310.1 21798944
AT4G17340.1 TraesCS3D01G141300.1 AT3G16310.1 21798944
AT4G17340.1 TraesCS3D01G274500.1 AT3G16310.1 21798944
AT4G17340.1 TraesCS2A01G368500.1 AT3G60600.1 21798944
AT4G17340.1 TraesCS2B01G385700.2 AT3G60600.1 21798944
AT4G17340.1 TraesCS2D01G365300.2 AT3G60600.1 21798944
AT4G17340.1 TraesCS6A01G237600.1 AT3G60600.1 21798944
AT4G17340.1 TraesCS6B01G266100.1 AT3G60600.1 21798944
AT4G17340.1 TraesCS6D01G220300.1 AT3G60600.1 21798944
AT4G17340.1 TraesCS7A01G300700.1 AT3G60600.1 21798944
AT4G17340.1 TraesCS7D01G296400.1 AT3G60600.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6D01G232100.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 100.0 100.0
HORVU6Hr1G062980.1 Barley endoplasmic reticulum, plasma membrane, vacuole 98.39 98.39
HORVU0Hr1G032130.2 Barley endoplasmic reticulum, plasma membrane, vacuole 98.39 98.39
TraesCS6B01G275100.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 98.39 98.39
Os02t0658100-01 Rice vacuole 75.9 91.75
KXG31086 Sorghum golgi, plasma membrane, vacuole 89.96 89.96
Zm00001d051362_P001 Maize plasma membrane 89.56 89.56
TraesCS2A01G414100.1 Wheat plasma membrane 87.95 88.31
Zm00001d017485_P002 Maize endoplasmic reticulum, extracellular, plasma membrane 87.55 87.2
GSMUA_Achr11P... Banana extracellular, plasma membrane 86.35 86.35
GSMUA_Achr11P... Banana endoplasmic reticulum, plasma membrane 83.94 83.94
PGSC0003DMT400030994 Potato endoplasmic reticulum, plasma membrane, vacuole 83.94 83.6
Solyc06g060760.2.1 Tomato endoplasmic reticulum 83.13 82.8
VIT_00s0229g00130.t01 Wine grape endoplasmic reticulum, plasma membrane, vacuole 81.93 81.6
VIT_00s2783g00010.t01 Wine grape extracellular 40.56 81.45
Bra026245.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 77.51 77.2
CDY65121 Canola endoplasmic reticulum, plasma membrane, vacuole 77.51 77.2
AT4G17340.1 Thale cress golgi, plasma membrane, vacuole 77.11 76.8
CDY64499 Canola endoplasmic reticulum, plasma membrane, vacuole 77.11 76.8
AT5G47450.1 Thale cress golgi, plasma membrane 77.11 76.8
Bra022131.1-P Field mustard extracellular 62.25 75.98
CDY51678 Canola plasma membrane, vacuole 75.9 75.6
CDY28932 Canola endoplasmic reticulum, extracellular, vacuole 63.05 74.76
CDY59296 Canola endoplasmic reticulum, plasma membrane, vacuole 75.1 74.5
CDX77768 Canola endoplasmic reticulum, plasma membrane, vacuole 75.1 74.5
Bra024943.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 74.7 74.1
KRH28112 Soybean mitochondrion 73.9 73.9
KRH77347 Soybean mitochondrion 73.9 73.9
TraesCS7A01G331300.1 Wheat unclear 69.88 70.16
TraesCS4A01G410800.1 Wheat golgi, plasma membrane, vacuole 62.25 62.0
TraesCS3A01G535300.1 Wheat plasma membrane 59.04 58.33
AT1G52180.1 Thale cress endoplasmic reticulum, extracellular, vacuole 28.11 56.45
TraesCS3A01G434600.1 Wheat endoplasmic reticulum, extracellular, vacuole 47.39 49.79
TraesCS3A01G155800.1 Wheat plasma membrane 46.18 46.37
TraesCS1A01G165400.1 Wheat golgi, mitochondrion, plasma membrane, plastid 48.19 45.63
TraesCS5A01G518300.1 Wheat golgi, plasma membrane, vacuole 46.59 45.31
TraesCS2A01G414200.1 Wheat plastid 46.59 44.27
TraesCS2A01G374400.1 Wheat plasma membrane 46.18 43.4
TraesCS2A01G198500.1 Wheat plasma membrane 39.76 34.14
TraesCS5A01G100000.1 Wheat plasma membrane 38.15 33.22
TraesCS2A01G065700.1 Wheat golgi 36.55 32.04
TraesCS6A01G222100.1 Wheat golgi, peroxisome, plasma membrane 36.55 31.82
TraesCS2A01G379900.1 Wheat plasma membrane 36.55 31.38
TraesCS5A01G530600.1 Wheat golgi, peroxisome, plasma membrane 36.55 31.16
TraesCS2A01G379800.1 Wheat plasma membrane 36.14 31.03
TraesCS4A01G312700.1 Wheat plasma membrane 35.74 30.58
TraesCS5A01G332300.1 Wheat plasma membrane 34.54 29.55
TraesCS6A01G082900.1 Wheat golgi, peroxisome, plasma membrane 34.94 29.49
TraesCS6A01G405700.1 Wheat golgi 34.54 29.45
TraesCS6A01G405600.1 Wheat plasma membrane 34.54 29.45
TraesCS5A01G181000.1 Wheat plastid 34.14 29.31
TraesCS6A01G245100.1 Wheat golgi, peroxisome, plasma membrane 33.73 28.97
TraesCS7A01G191200.1 Wheat golgi, peroxisome, plasma membrane 29.72 24.34
TraesCS4A01G286200.1 Wheat golgi, peroxisome, plasma membrane 28.92 23.68
TraesCS2A01G407700.2 Wheat golgi, peroxisome, plasma membrane 25.7 22.15
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.3InterPro:Aquaporin-likeInterPro:Aquaporin_transptrGO:GO:0003674GO:GO:0005215
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0015267GO:GO:0016020GO:GO:0055085
InterPro:IPR023271InterPro:MIPInterPro:MIP_CSPFAM:PF00230PRINTS:PR00783ScanProsite:PS00221
PANTHER:PTHR19139PANTHER:PTHR19139:SF257SUPFAM:SSF81338TIGRFAMs:TIGR00861TMHMM:TMhelixEnsemblPlantsGene:TraesCS6A01G250300
EnsemblPlants:TraesCS6A01G250300.1TIGR:cd00333::::
Description
No Description!
Coordinates
chr6A:+:464537913..464538853
Molecular Weight (calculated)
25194.6 Da
IEP (calculated)
5.960
GRAVY (calculated)
0.880
Length
249 amino acids
Sequence
(BLAST)
001: MVKLAFGSCG DSFSATSVRA YVAEFIATLL FVFAGVGSAI AYGKLTDDGA LDPAGLVAIA IAHAFALFVG VAIAANISGG HLNPAVTFGL AVGGHITILT
101: GIFYWVAQLL GSTAACFLLK FVTHGKAIPT HGVAAGMNEF EGVVMEIVIT FALVYTVYAT AADPKKGSLG TIAPIAIGFI VGANILAAGP FSGGSMNPAR
201: SFGPAVAAGN FAGNWVYWVG PLIGGGLAGF VYGDVFIASY QPVADQDYA
Best Arabidopsis Sequence Match ( AT5G47450.1 )
(BLAST)
001: MVKIEVGSVG DSFSVSSLKA YLSEFIATLL FVFAGVGSAV AFAKLTSDGA LDPAGLVAIA IAHAFALFVG VSIAANISGG HLNPAVTLGL AIGGNITLIT
101: GFFYWIAQCL GSIVACLLLV FVTNGKSVPT HGVSAGLGAV EGVVMEIVVT FALVYTVYAT AADPKKGSLG TIAPIAIGFI VGANILAAGP FSGGSMNPAR
201: SFGPAVVSGD LSQIWIYWVG PLVGGALAGL IYGDVFIGSY EAVETREIRV
Arabidopsis Description
TIP2-3Aquaporin TIP2-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGL2]
SUBAcon: [golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.