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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:
  • mitochondrion 1
  • endoplasmic reticulum 3
  • extracellular 2
  • vacuole 3
  • plasma membrane 3
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:secretory
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G340600.1
TraesCS1D01G342600.1
TraesCS2A01G368500.1
TraesCS2B01G385700.2
TraesCS2D01G365300.2
TraesCS3A01G274800.1
TraesCS3A01G313000.1
TraesCS3B01G158900.1
TraesCS3B01G308400.1
TraesCS3D01G141300.1
TraesCS3D01G274500.1
TraesCS6A01G237600.1
TraesCS6B01G266100.1
TraesCS6D01G220300.1
TraesCS7A01G300700.1
TraesCS7D01G296400.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G17340.1 TraesCS1A01G340600.1 AT3G16310.1 21798944
AT4G17340.1 TraesCS1D01G342600.1 AT3G16310.1 21798944
AT4G17340.1 TraesCS3A01G274800.1 AT3G16310.1 21798944
AT4G17340.1 TraesCS3A01G313000.1 AT3G16310.1 21798944
AT4G17340.1 TraesCS3B01G158900.1 AT3G16310.1 21798944
AT4G17340.1 TraesCS3B01G308400.1 AT3G16310.1 21798944
AT4G17340.1 TraesCS3D01G141300.1 AT3G16310.1 21798944
AT4G17340.1 TraesCS3D01G274500.1 AT3G16310.1 21798944
AT4G17340.1 TraesCS2A01G368500.1 AT3G60600.1 21798944
AT4G17340.1 TraesCS2B01G385700.2 AT3G60600.1 21798944
AT4G17340.1 TraesCS2D01G365300.2 AT3G60600.1 21798944
AT4G17340.1 TraesCS6A01G237600.1 AT3G60600.1 21798944
AT4G17340.1 TraesCS6B01G266100.1 AT3G60600.1 21798944
AT4G17340.1 TraesCS6D01G220300.1 AT3G60600.1 21798944
AT4G17340.1 TraesCS7A01G300700.1 AT3G60600.1 21798944
AT4G17340.1 TraesCS7D01G296400.1 AT3G60600.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6A01G250300.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 98.39 98.39
TraesCS6D01G232100.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 98.39 98.39
HORVU6Hr1G062980.1 Barley endoplasmic reticulum, plasma membrane, vacuole 97.59 97.59
HORVU0Hr1G032130.2 Barley endoplasmic reticulum, plasma membrane, vacuole 97.59 97.59
Os02t0658100-01 Rice vacuole 74.7 90.29
KXG31086 Sorghum golgi, plasma membrane, vacuole 89.56 89.56
Zm00001d051362_P001 Maize plasma membrane 88.75 88.75
Zm00001d017485_P002 Maize endoplasmic reticulum, extracellular, plasma membrane 87.15 86.8
TraesCS2B01G433200.1 Wheat plasma membrane 86.35 86.69
GSMUA_Achr11P... Banana extracellular, plasma membrane 85.14 85.14
GSMUA_Achr11P... Banana endoplasmic reticulum, plasma membrane 82.73 82.73
PGSC0003DMT400030994 Potato endoplasmic reticulum, plasma membrane, vacuole 82.73 82.4
Solyc06g060760.2.1 Tomato endoplasmic reticulum 81.93 81.6
VIT_00s0229g00130.t01 Wine grape endoplasmic reticulum, plasma membrane, vacuole 81.12 80.8
VIT_00s2783g00010.t01 Wine grape extracellular 40.16 80.65
Bra026245.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 76.31 76.0
CDY65121 Canola endoplasmic reticulum, plasma membrane, vacuole 76.31 76.0
AT5G47450.1 Thale cress golgi, plasma membrane 76.31 76.0
AT4G17340.1 Thale cress golgi, plasma membrane, vacuole 75.9 75.6
CDY64499 Canola endoplasmic reticulum, plasma membrane, vacuole 75.9 75.6
Bra022131.1-P Field mustard extracellular 61.85 75.49
CDY51678 Canola plasma membrane, vacuole 75.1 74.8
CDY28932 Canola endoplasmic reticulum, extracellular, vacuole 63.05 74.76
CDX77768 Canola endoplasmic reticulum, plasma membrane, vacuole 75.1 74.5
CDY59296 Canola endoplasmic reticulum, plasma membrane, vacuole 75.1 74.5
Bra024943.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 74.7 74.1
KRH28112 Soybean mitochondrion 73.09 73.09
KRH77347 Soybean mitochondrion 73.09 73.09
TraesCS7B01G243000.1 Wheat plasma membrane 70.68 70.97
TraesCS4B01G310900.1 Wheat unclear 61.45 61.2
TraesCS3B01G608500.1 Wheat plasma membrane 58.23 57.54
AT1G52180.1 Thale cress endoplasmic reticulum, extracellular, vacuole 27.71 55.65
TraesCS3B01G182200.1 Wheat endoplasmic reticulum, extracellular, vacuole 49.8 49.4
TraesCS3B01G182400.1 Wheat plasma membrane 45.38 45.56
TraesCS1B01G182200.1 Wheat golgi 47.39 44.87
TraesCS4B01G349500.1 Wheat plasma membrane 45.78 44.71
TraesCS2B01G433300.1 Wheat endoplasmic reticulum 42.97 43.15
TraesCS2B01G391400.1 Wheat extracellular, plasma membrane, vacuole 45.38 42.64
TraesCS2B01G225900.1 Wheat golgi 39.36 33.79
TraesCS6B01G398000.1 Wheat extracellular 16.87 32.81
TraesCS5B01G570800.1 Wheat golgi, peroxisome, plasma membrane 36.95 32.62
TraesCS2B01G077700.1 Wheat plasma membrane 36.95 32.39
TraesCS6B01G259000.1 Wheat golgi, peroxisome, plasma membrane 36.95 32.17
TraesCS7B01G002000.1 Wheat golgi, peroxisome, plasma membrane 36.55 32.04
TraesCS2B01G396800.1 Wheat golgi 36.95 31.72
TraesCS2B01G396700.2 Wheat plasma membrane 36.55 30.85
TraesCS4B01G362300.1 Wheat golgi, peroxisome, plasma membrane 35.74 30.48
TraesCS7B01G003800.1 Wheat golgi, peroxisome, plasma membrane 35.34 30.45
TraesCS5B01G567600.1 Wheat golgi, peroxisome, plasma membrane 35.34 30.24
TraesCS7B01G003900.1 Wheat golgi, peroxisome, plasma membrane 35.34 30.24
TraesCS5B01G332500.1 Wheat plasma membrane 34.94 29.9
TraesCS5B01G567500.1 Wheat golgi, peroxisome, plasma membrane 34.54 29.76
TraesCS6B01G450000.1 Wheat unclear 34.54 29.45
TraesCS6B01G450200.1 Wheat plastid 34.14 29.11
TraesCS5B01G178700.1 Wheat plasma membrane 34.14 29.11
TraesCS6B01G279200.1 Wheat plastid 33.33 28.62
TraesCS6B01G114400.1 Wheat golgi, peroxisome, plasma membrane 33.73 28.47
TraesCS2B01G425600.1 Wheat golgi, plasma membrane 32.93 28.47
TraesCS2B01G605900.1 Wheat golgi, peroxisome, plasma membrane 32.93 28.37
TraesCS7B01G096000.1 Wheat golgi, peroxisome, plasma membrane 30.12 24.67
TraesCS4B01G027600.1 Wheat plasma membrane 27.71 23.71
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.3InterPro:Aquaporin-likeInterPro:Aquaporin_transptrGO:GO:0003674GO:GO:0005215
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0015267GO:GO:0016020GO:GO:0055085
InterPro:IPR023271InterPro:MIPInterPro:MIP_CSPFAM:PF00230PRINTS:PR00783ScanProsite:PS00221
PANTHER:PTHR19139PANTHER:PTHR19139:SF257SUPFAM:SSF81338TIGRFAMs:TIGR00861TMHMM:TMhelixEnsemblPlantsGene:TraesCS6B01G275100
EnsemblPlants:TraesCS6B01G275100.1TIGR:cd00333::::
Description
No Description!
Coordinates
chr6B:-:497215832..497216751
Molecular Weight (calculated)
25266.7 Da
IEP (calculated)
5.960
GRAVY (calculated)
0.884
Length
249 amino acids
Sequence
(BLAST)
001: MVKLAFGSCG DSFSATSIRA YVAEFIATLL FVFAGVGSAI AYGKITDDGA LDPVGLVAIA IAHAFALFVG VAIAANISGG HLNPAVTFGL AVGGHITILT
101: GIFYWVAQLL GSTAACFLLK FVTHGKAIPT HGVTAGMNEF EGVVMEIVIT FALVYTVYAT AADPKKGSLG TIAPIAIGFI VGANILAAGP FSGGSMNPAR
201: SFGPAVAAGN FAGNWVYWVG PLIGGGLAGF VYGDVFIASY QPVADQDYA
Best Arabidopsis Sequence Match ( AT5G47450.1 )
(BLAST)
001: MVKIEVGSVG DSFSVSSLKA YLSEFIATLL FVFAGVGSAV AFAKLTSDGA LDPAGLVAIA IAHAFALFVG VSIAANISGG HLNPAVTLGL AIGGNITLIT
101: GFFYWIAQCL GSIVACLLLV FVTNGKSVPT HGVSAGLGAV EGVVMEIVVT FALVYTVYAT AADPKKGSLG TIAPIAIGFI VGANILAAGP FSGGSMNPAR
201: SFGPAVVSGD LSQIWIYWVG PLVGGALAGL IYGDVFIGSY EAVETREIRV
Arabidopsis Description
TIP2-3Aquaporin TIP2-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGL2]
SUBAcon: [plasma membrane,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.