Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G567500.1 | Wheat | golgi, peroxisome, plasma membrane | 95.88 | 96.54 |
| TraesCS7B01G003900.1 | Wheat | golgi, peroxisome, plasma membrane | 96.22 | 96.22 |
| TraesCS7B01G003800.1 | Wheat | golgi, peroxisome, plasma membrane | 94.85 | 95.5 |
| HORVU5Hr1G125600.1 | Barley | golgi, peroxisome, plasma membrane | 94.5 | 94.5 |
| TraesCS4B01G362300.1 | Wheat | golgi, peroxisome, plasma membrane | 80.76 | 80.48 |
| TraesCS5B01G570800.1 | Wheat | golgi, peroxisome, plasma membrane | 73.2 | 75.53 |
| TraesCS6B01G114400.1 | Wheat | golgi, peroxisome, plasma membrane | 75.6 | 74.58 |
| TraesCS7B01G002000.1 | Wheat | golgi, peroxisome, plasma membrane | 72.16 | 73.94 |
| OQU91911 | Sorghum | plasma membrane | 69.76 | 71.99 |
| TraesCS2B01G225900.1 | Wheat | golgi | 70.1 | 70.34 |
| Zm00001d014285_P001 | Maize | plasma membrane | 68.38 | 70.32 |
| TraesCS2B01G396800.1 | Wheat | golgi | 69.42 | 69.66 |
| Os03t0861300-01 | Rice | cytosol, peroxisome, plasma membrane | 67.01 | 69.64 |
| TraesCS6B01G259000.1 | Wheat | golgi, peroxisome, plasma membrane | 68.38 | 69.58 |
| TraesCS2B01G396700.2 | Wheat | plasma membrane | 69.07 | 68.14 |
| TraesCS6B01G398000.1 | Wheat | extracellular | 29.55 | 67.19 |
| TraesCS2B01G077700.1 | Wheat | plasma membrane | 65.29 | 66.9 |
| TraesCS5B01G332500.1 | Wheat | plasma membrane | 60.48 | 60.48 |
| TraesCS2B01G425600.1 | Wheat | golgi, plasma membrane | 58.76 | 59.38 |
| TraesCS6B01G279200.1 | Wheat | plastid | 59.11 | 59.31 |
| TraesCS6B01G450000.1 | Wheat | unclear | 59.11 | 58.9 |
| TraesCS2B01G605900.1 | Wheat | golgi, peroxisome, plasma membrane | 58.08 | 58.48 |
| TraesCS6B01G450200.1 | Wheat | plastid | 58.42 | 58.22 |
| TraesCS5B01G178700.1 | Wheat | plasma membrane | 58.08 | 57.88 |
| TraesCS7B01G096000.1 | Wheat | golgi, peroxisome, plasma membrane | 52.58 | 50.33 |
| TraesCS4B01G027600.1 | Wheat | plasma membrane | 47.42 | 47.42 |
| TraesCS7B01G243000.1 | Wheat | plasma membrane | 31.27 | 36.69 |
| TraesCS2B01G433200.1 | Wheat | plasma membrane | 30.58 | 35.89 |
| TraesCS6B01G275100.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 30.24 | 35.34 |
| TraesCS3B01G608500.1 | Wheat | plasma membrane | 30.58 | 35.32 |
| TraesCS4B01G310900.1 | Wheat | unclear | 29.9 | 34.8 |
| TraesCS2B01G391400.1 | Wheat | extracellular, plasma membrane, vacuole | 30.58 | 33.58 |
| TraesCS3B01G182200.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 28.87 | 33.47 |
| TraesCS1B01G182200.1 | Wheat | golgi | 28.87 | 31.94 |
| TraesCS3B01G182400.1 | Wheat | plasma membrane | 25.43 | 29.84 |
| TraesCS2B01G433300.1 | Wheat | endoplasmic reticulum | 25.09 | 29.44 |
| TraesCS4B01G349500.1 | Wheat | plasma membrane | 25.77 | 29.41 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.2 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0055085 |
| InterPro:IPR023271 | InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 | PRINTS:PR00783 | ScanProsite:PS00221 |
| PANTHER:PTHR19139 | PANTHER:PTHR19139:SF163 | SUPFAM:SSF81338 | TIGRFAMs:TIGR00861 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS5B01G567600 |
| EnsemblPlants:TraesCS5B01G567600.1 | TIGR:cd00333 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr5B:-:711279884..711281010
Molecular Weight (calculated)
30454.9 Da
IEP (calculated)
7.604
GRAVY (calculated)
0.538
Length
291 amino acids
Sequence
(BLAST)
(BLAST)
001: MTMAAAQGKL SPEAIDNEVT SNGSAKDYLD PPPAPLVDAG ELGKWSLYRA VIAEFTATLL FVYVAVATVV GHKRQTDAQA CSGAGVLGIA WAFGGTIAVL
101: VYCTAGISGG HINPAVTFGL LLARKVSLPR AFLYIVAQCV GAICGAALVR AVHGGHHYVL YGGGANELAP GYSRTAGLIA EIAGTFVLVY TVFSATDPKR
201: IAWDPHVPVL APLLIGFAVL MAHLATIPVT GTGINPARSF GAAVVYNGGN AWDDQWIFWV GPFIGAAMAM VYHQYILRNS SIFRSNYDAA V
101: VYCTAGISGG HINPAVTFGL LLARKVSLPR AFLYIVAQCV GAICGAALVR AVHGGHHYVL YGGGANELAP GYSRTAGLIA EIAGTFVLVY TVFSATDPKR
201: IAWDPHVPVL APLLIGFAVL MAHLATIPVT GTGINPARSF GAAVVYNGGN AWDDQWIFWV GPFIGAAMAM VYHQYILRNS SIFRSNYDAA V
001: MAKDVEAVPG EGFQTRDYQD PPPAPFIDGA ELKKWSFYRA VIAEFVATLL FLYITVLTVI GYKIQSDTDA GGVDCGGVGI LGIAWAFGGM IFILVYCTAG
101: ISGGHINPAV TFGLFLARKV SLPRALLYII AQCLGAICGV GFVKAFQSSY YTRYGGGANS LADGYSTGTG LAAEIIGTFV LVYTVFSATD PKRSARDSHV
201: PVLAPLPIGF AVFMVHLATI PITGTGINPA RSFGAAVIYN KSKPWDDHWI FWVGPFIGAA IAAFYHQFVL RASGSKSLGS FRSAANV
101: ISGGHINPAV TFGLFLARKV SLPRALLYII AQCLGAICGV GFVKAFQSSY YTRYGGGANS LADGYSTGTG LAAEIIGTFV LVYTVFSATD PKRSARDSHV
201: PVLAPLPIGF AVFMVHLATI PITGTGINPA RSFGAAVIYN KSKPWDDHWI FWVGPFIGAA IAAFYHQFVL RASGSKSLGS FRSAANV
Arabidopsis Description
PIP2-1PIP2A [Source:UniProtKB/TrEMBL;Acc:A0A178V8P4]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.