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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:secretory
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
 plastid: 22160430
golgi: 25769308
msms PMID: 22160430 doi
AH Kamal, K Cho, S Komatsu, N Uozumi, JS Choi, SH Woo
Department of Crop Science, Chungbuk National University, 410 Seongbong-ro, Heungdeok-gu, Cheongju, Chungbuk, 361-763, Korea.
msms PMID: 25769308 doi
AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2A01G379900.1 Wheat plasma membrane 99.31 99.31
TraesCS2D01G376100.1 Wheat plasma membrane 98.97 98.97
HORVU2Hr1G089940.3 Barley plasma membrane 96.9 96.9
TraesCS2B01G396700.2 Wheat plasma membrane 96.9 95.25
GSMUA_AchrUn_... Banana extracellular 60.69 90.26
Zm00001d017288_P001 Maize plasma membrane 89.31 89.93
TraesCS6B01G259000.1 Wheat golgi, peroxisome, plasma membrane 88.62 89.86
Zm00001d051174_P002 Maize plasma membrane 89.31 89.62
GSMUA_Achr4P20780_001 Banana extracellular 60.34 89.29
GSMUA_Achr11P... Banana extracellular 60.0 88.78
EES05459 Sorghum plasma membrane 88.28 88.58
GSMUA_Achr8P18910_001 Banana extracellular 59.31 87.76
Os02t0629200-02 Rice plasma membrane 86.55 87.15
TraesCS2B01G225900.1 Wheat golgi 83.45 83.45
TraesCS6B01G398000.1 Wheat extracellular 33.45 75.78
TraesCS2B01G077700.1 Wheat plasma membrane 73.45 75.0
TraesCS5B01G570800.1 Wheat golgi, peroxisome, plasma membrane 72.41 74.47
TraesCS7B01G002000.1 Wheat golgi, peroxisome, plasma membrane 72.41 73.94
TraesCS7B01G003900.1 Wheat golgi, peroxisome, plasma membrane 70.69 70.45
TraesCS5B01G567500.1 Wheat golgi, peroxisome, plasma membrane 70.0 70.24
TraesCS7B01G003800.1 Wheat golgi, peroxisome, plasma membrane 69.31 69.55
TraesCS5B01G567600.1 Wheat golgi, peroxisome, plasma membrane 69.66 69.42
TraesCS4B01G362300.1 Wheat golgi, peroxisome, plasma membrane 68.62 68.15
TraesCS5B01G332500.1 Wheat plasma membrane 67.93 67.7
TraesCS2B01G425600.1 Wheat golgi, plasma membrane 66.9 67.36
TraesCS6B01G450200.1 Wheat plastid 67.24 66.78
TraesCS6B01G450000.1 Wheat unclear 66.9 66.44
TraesCS6B01G279200.1 Wheat plastid 66.21 66.21
TraesCS5B01G178700.1 Wheat plasma membrane 66.55 66.1
TraesCS2B01G605900.1 Wheat golgi, peroxisome, plasma membrane 65.86 66.09
TraesCS6B01G114400.1 Wheat golgi, peroxisome, plasma membrane 64.48 63.39
TraesCS7B01G096000.1 Wheat golgi, peroxisome, plasma membrane 61.03 58.22
TraesCS4B01G027600.1 Wheat plasma membrane 54.14 53.95
TraesCS7B01G243000.1 Wheat plasma membrane 32.41 37.9
TraesCS2B01G433200.1 Wheat plasma membrane 32.07 37.5
TraesCS6B01G275100.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 31.72 36.95
TraesCS3B01G608500.1 Wheat plasma membrane 31.38 36.11
TraesCS4B01G310900.1 Wheat unclear 29.66 34.4
TraesCS3B01G182200.1 Wheat endoplasmic reticulum, extracellular, vacuole 29.66 34.26
TraesCS1B01G182200.1 Wheat golgi 29.31 32.32
TraesCS2B01G391400.1 Wheat extracellular, plasma membrane, vacuole 28.62 31.32
TraesCS3B01G182400.1 Wheat plasma membrane 26.21 30.65
TraesCS4B01G349500.1 Wheat plasma membrane 26.55 30.2
TraesCS2B01G433300.1 Wheat endoplasmic reticulum 24.14 28.23
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.2InterPro:Aquaporin-likeInterPro:Aquaporin_transptrGO:GO:0003674GO:GO:0005215
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0015267GO:GO:0016020GO:GO:0055085
InterPro:IPR023271InterPro:MIPInterPro:MIP_CSPFAM:PF00230PRINTS:PR00783ScanProsite:PS00221
PANTHER:PTHR19139PANTHER:PTHR19139:SF137SUPFAM:SSF81338TIGRFAMs:TIGR00861TMHMM:TMhelixEnsemblPlantsGene:TraesCS2B01G396800
EnsemblPlants:TraesCS2B01G396800.1TIGR:cd00333SEG:seg:::
Description
No Description!
Coordinates
chr2B:-:563182757..563184957
Molecular Weight (calculated)
30383.7 Da
IEP (calculated)
7.962
GRAVY (calculated)
0.508
Length
290 amino acids
Sequence
(BLAST)
001: MAKDIEAAPP GGEYGAKDYS DPPPAPLFDA EELTKWSLYR AVIAEFVATL LFLYITVATV IGYKHQADPA GPSAADAACS GVGILGIAWA FGGMIFVLVY
101: CTAGVSGGHI NPAVTFGLFL ARKVSLVRAL LYIIAQCLGA ICGVGLVKGF QSAFYVRYGG GANELSSGYS KGTGLAAEII GTFVLVYTVF SATDPKRSAR
201: DSHVPVLAPL PIGFAVFMVH LATIPITGTG INPARSFGAA VIYNNEKAWD DHWIFWVGPF IGAAIAAAYH QYVLRASATK LGSSASFGRS
Best Arabidopsis Sequence Match ( AT5G60660.1 )
(BLAST)
001: MAKDLDVNES GPPAARDYKD PPPAPFFDME ELRKWPLYRA VIAEFVATLL FLYVSILTVI GYKAQTDATA GGVDCGGVGI LGIAWAFGGM IFVLVYCTAG
101: ISGGHINPAV TVGLFLARKV SLVRTVLYIV AQCLGAICGC GFVKAFQSSY YTRYGGGANE LADGYNKGTG LGAEIIGTFV LVYTVFSATD PKRNARDSHV
201: PVLAPLPIGF AVFMVHLATI PITGTGINPA RSFGAAVIYN NEKAWDDQWI FWVGPMIGAA AAAFYHQFIL RAAAIKALGS FGSFGSFRSF A
Arabidopsis Description
PIP2-4PIP2F [Source:UniProtKB/TrEMBL;Acc:A0A178UG45]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.