CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 2
vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
EES05123

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G25810.1	EES05123	AT1G27300.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039293_P001	Maize	plastid	94.84	83.28
Os01t0232000-00	Rice	cytosol, endoplasmic reticulum, plasma membrane	81.35	81.67
TraesCS3B01G182200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	78.17	78.49
TraesCS3D01G163400.1	Wheat	endoplasmic reticulum, extracellular, vacuole	76.19	78.05
TraesCS3A01G434600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	72.62	77.22
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, vacuole	69.84	70.68
KRH62059	Soybean	cytosol, plasma membrane, vacuole	61.9	63.41
KRH52727	Soybean	cytosol	60.71	62.2
PGSC0003DMT400024847	Potato	extracellular, plasma membrane, vacuole	59.52	60.73
AT2G25810.1	Thale cress	cytosol, golgi, plasma membrane	59.52	60.24
Solyc08g066840.2.1	Tomato	endoplasmic reticulum, plasma membrane	58.73	59.92
Bra034271.1-P	Field mustard	cytosol, plasma membrane, vacuole	59.13	59.84
CDX77009	Canola	cytosol, plasma membrane, vacuole	59.13	59.84
KXG31483	Sorghum	extracellular, golgi, plasma membrane	58.33	58.1
GSMUA_Achr9P06260_001	Banana	cytosol, golgi, plasma membrane	58.73	58.04
HORVU3Hr1G031620.5	Barley	nucleus, peroxisome, plastid	71.43	56.6
CDY35336	Canola	extracellular	31.75	55.94
EER92857	Sorghum	cytosol	52.78	53.2
GSMUA_Achr1P13800_001	Banana	cytosol	52.78	52.36
VIT_04s0008g03550.t01	Wine grape	plasma membrane	59.52	49.83
EES12617	Sorghum	plasma membrane	49.21	49.8
KXG31086	Sorghum	golgi, plasma membrane, vacuole	48.81	49.4
EES04303	Sorghum	cytosol	49.21	48.06
EER94020	Sorghum	golgi, mitochondrion, plasma membrane	50.0	47.37
EES17913	Sorghum	cytosol, plastid	58.33	46.82
EER89797	Sorghum	plasma membrane	46.03	46.77
EES11105	Sorghum	mitochondrion, plasma membrane	45.24	42.54
EER95659	Sorghum	mitochondrion	43.65	40.59
OQU82093	Sorghum	plasma membrane	39.68	37.45
OQU91911	Sorghum	plasma membrane	32.94	29.43
EER98453	Sorghum	plasma membrane	33.33	29.37
EER98452	Sorghum	plasma membrane	33.33	29.37
EES05459	Sorghum	plasma membrane	33.33	29.07
EER98457	Sorghum	plasma membrane	32.94	29.02
EER98454	Sorghum	plasma membrane	32.94	29.02
EES11124	Sorghum	plasma membrane	33.33	28.77
EER98451	Sorghum	plasma membrane	32.54	28.28
OQU85985	Sorghum	cytosol, peroxisome, plasma membrane	31.35	27.24
EES11257	Sorghum	cytosol, peroxisome, plasma membrane	30.56	26.74
EER89434	Sorghum	peroxisome	30.95	26.35
EES07484	Sorghum	plasma membrane	30.16	26.3
OQU88961	Sorghum	plastid	31.75	21.39
KXG36091	Sorghum	cytosol, peroxisome, plasma membrane	22.62	17.48

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.3	EntrezGene:8078102	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	UniProt:C5XJN1
EnsemblPlants:EES02191	ProteinID:EES02191	ProteinID:EES02191.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005886	GO:GO:0005887
GO:GO:0006810	GO:GO:0006833	GO:GO:0008150	GO:GO:0009705	GO:GO:0015250	GO:GO:0015267
GO:GO:0016020	GO:GO:0016021	GO:GO:0034220	GO:GO:0042807	GO:GO:0055085	InterPro:IPR023271
InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139
PANTHER:PTHR19139:SF186	EnsemblPlantsGene:SORBI_3003G007200	SUPFAM:SSF81338	TIGRFAMs:TIGR00861	TMHMM:TMhelix	UniParc:UPI0001A84D93
RefSeq:XP_002457071.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:622245..623367

Molecular Weight (calculated)

25272.3 Da

IEP (calculated)

7.323

GRAVY (calculated)

0.930

Length

252 amino acids

Sequence
(BLAST)

001: MAKFALGHHR EVSDAGCVRA VLAELILTFL FVFAGVGSAM ATGKLAGGGG DTVVGLTAVA LAHTLVVAVM VSAGLHVSGG HINPAVTLGL AATGRITLFR
101: SALYVAAQLL GSALACLLLA FLTAGGGGGV PVHALGDGVG ALRGVLMEVV LTFSLLFAVY ATVVDPRRAV GSMGPLLVGL VVGANVLAGG PFSGASMNPA
201: RSFGPALVAG VWADHWVYWV GPLIGGLLAG LVYDGLFMAQ AGHEPLPRDD HF

Best Arabidopsis Sequence Match ( AT2G25810.1 )
(BLAST)

001: MKKIELGHHS EAAKPDCIKA LIVEFITTFL FVFAGVGSAM ATDSLVGNTL VGLFAVAVAH AFVVAVMISA GHISGGHLNP AVTLGLLLGG HISVFRAFLY
101: WIDQLLASSA ACFLLSYLTG GMGTPVHTLA SGVSYTQGII WEIILTFSLL FTVYATIVDP KKGSLDGFGP LLTGFVVGAN ILAGGAFSGA SMNPARSFGP
201: ALVSGNWTDH WVYWVGPLIG GGLAGFIYEN VLIDRPHVPV ADDEQPLLN

Arabidopsis Description

TIP4-1Aquaporin TIP4-1 [Source:UniProtKB/Swiss-Prot;Acc:O82316]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.