Subcellular Localization
min:
: max
Winner_takes_all: extracellular, cytosol, vacuole, plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 4
- cytosol 1
- extracellular 2
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g044330.1.1 | Tomato | plastid | 97.58 | 97.58 |
| PGSC0003DMT400042613 | Potato | cytosol, extracellular, plasma membrane | 91.13 | 90.76 |
| KRH44312 | Soybean | extracellular | 82.26 | 82.26 |
| KRH47241 | Soybean | mitochondrion | 82.26 | 82.26 |
| GSMUA_Achr6P05830_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 78.23 | 79.18 |
| Os06t0336200-01 | Rice | nucleus | 78.63 | 78.63 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane, plastid, vacuole | 77.02 | 78.6 |
| GSMUA_Achr9P28940_001 | Banana | plasma membrane | 77.02 | 77.96 |
| TraesCS7B01G243000.1 | Wheat | plasma membrane | 77.82 | 77.82 |
| EER89797 | Sorghum | plasma membrane | 77.42 | 77.42 |
| PGSC0003DMT400006558 | Potato | endoplasmic reticulum, plasma membrane | 77.42 | 77.11 |
| TraesCS7A01G331300.1 | Wheat | unclear | 77.02 | 77.02 |
| PGSC0003DMT400030994 | Potato | endoplasmic reticulum, plasma membrane, vacuole | 77.02 | 76.4 |
| HORVU7Hr1G081770.8 | Barley | plasma membrane | 76.61 | 76.31 |
| VIT_09s0002g04020.t01 | Wine grape | plasma membrane, vacuole | 74.19 | 73.9 |
| TraesCS7D01G339600.1 | Wheat | plasma membrane | 76.61 | 68.1 |
| PGSC0003DMT400072432 | Potato | cytosol | 61.29 | 61.29 |
| PGSC0003DMT400018375 | Potato | cytosol | 56.85 | 56.4 |
| PGSC0003DMT400077927 | Potato | cytosol, plasma membrane, plastid, vacuole | 55.24 | 54.15 |
| PGSC0003DMT400069330 | Potato | cytosol | 52.82 | 50.58 |
| PGSC0003DMT400024847 | Potato | extracellular, plasma membrane, vacuole | 49.6 | 49.8 |
| PGSC0003DMT400039507 | Potato | cytosol, golgi, plasma membrane | 52.02 | 49.62 |
| PGSC0003DMT400038394 | Potato | plastid | 47.58 | 47.01 |
| PGSC0003DMT400053882 | Potato | extracellular | 30.24 | 38.27 |
| PGSC0003DMT400009240 | Potato | cytosol, extracellular, plasma membrane | 35.48 | 35.06 |
| PGSC0003DMT400027154 | Potato | plasma membrane | 38.31 | 33.81 |
| PGSC0003DMT400053877 | Potato | plasma membrane | 37.5 | 33.33 |
| PGSC0003DMT400015824 | Potato | plasma membrane | 37.5 | 32.86 |
| PGSC0003DMT400068708 | Potato | plasma membrane | 37.5 | 32.86 |
| PGSC0003DMT400020870 | Potato | plasma membrane | 37.5 | 32.4 |
| PGSC0003DMT400062174 | Potato | plasma membrane | 37.1 | 32.17 |
| PGSC0003DMT400000151 | Potato | cytosol, peroxisome, plasma membrane | 35.08 | 30.53 |
| PGSC0003DMT400053881 | Potato | plasma membrane | 37.1 | 29.97 |
| PGSC0003DMT400053479 | Potato | plasma membrane | 34.27 | 29.72 |
| PGSC0003DMT400014809 | Potato | peroxisome | 33.47 | 28.92 |
| PGSC0003DMT400060322 | Potato | mitochondrion | 31.85 | 28.73 |
| PGSC0003DMT400032134 | Potato | cytosol, peroxisome, plasma membrane | 33.06 | 28.67 |
| PGSC0003DMT400012780 | Potato | cytosol, peroxisome, plasma membrane | 33.06 | 28.47 |
| PGSC0003DMT400064008 | Potato | extracellular | 11.69 | 25.89 |
Protein Annotations
| Gene3D:1.20.1080.10 | EntrezGene:102593526 | MapMan:24.3.1.3 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0055085 | InterPro:IPR023271 | UniProt:M1CIC6 | InterPro:MIP | InterPro:MIP_CS |
| PFAM:PF00230 | EnsemblPlantsGene:PGSC0003DMG400026463 | PGSC:PGSC0003DMG400026463 | EnsemblPlants:PGSC0003DMT400068047 | PRINTS:PR00783 | ScanProsite:PS00221 |
| PANTHER:PTHR19139 | PANTHER:PTHR19139:SF257 | SUPFAM:SSF81338 | TIGRFAMs:TIGR00861 | TMHMM:TMhelix | UniParc:UPI0001B3510D |
| RefSeq:XP_006359462.1 | SEG:seg | : | : | : | : |
Description
Aquaporin TIP2;3 [Source:PGSC_GENE;Acc:PGSC0003DMG400026463]
Coordinates
chr12:+:50722190..50723610
Molecular Weight (calculated)
25000.6 Da
IEP (calculated)
5.952
GRAVY (calculated)
1.012
Length
248 amino acids
Sequence
(BLAST)
(BLAST)
001: MPCIAFGRFD DSFSLGSIKA YIAEFISTLL FVFAGVGSAI AYNKVTADAA LDPSGLVAVA VCHGFALFVA VAIAANISGG HVNPAVTFGL ALGGQITVLT
101: GLFYWIAQLL GAIVASYLLK VVTGGMAVPI HGVAAGVGAA EGVVMEIIIT FALVYTVYAT AADPKNGALG TIAPIAIGFI VGANILAAGP FSGGSMNPAR
201: SFGPAVVSGN FAGIWIYWVG PLVGGGLAGL IYSNVFMNHE HAPLSGDF
101: GLFYWIAQLL GAIVASYLLK VVTGGMAVPI HGVAAGVGAA EGVVMEIIIT FALVYTVYAT AADPKNGALG TIAPIAIGFI VGANILAAGP FSGGSMNPAR
201: SFGPAVVSGN FAGIWIYWVG PLVGGGLAGL IYSNVFMNHE HAPLSGDF
001: MAGVAFGSFD DSFSLASLRA YLAEFISTLL FVFAGVGSAI AYAKLTSDAA LDTPGLVAIA VCHGFALFVA VAIGANISGG HVNPAVTFGL AVGGQITVIT
101: GVFYWIAQLL GSTAACFLLK YVTGGLAVPT HSVAAGLGSI EGVVMEIIIT FALVYTVYAT AADPKKGSLG TIAPLAIGLI VGANILAAGP FSGGSMNPAR
201: SFGPAVAAGD FSGHWVYWVG PLIGGGLAGL IYGNVFMGSS EHVPLASADF
101: GVFYWIAQLL GSTAACFLLK YVTGGLAVPT HSVAAGLGSI EGVVMEIIIT FALVYTVYAT AADPKKGSLG TIAPLAIGLI VGANILAAGP FSGGSMNPAR
201: SFGPAVAAGD FSGHWVYWVG PLIGGGLAGL IYGNVFMGSS EHVPLASADF
Arabidopsis Description
TIP2-1Aquaporin TIP2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q41951]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.