Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G312700.1 | Wheat | plasma membrane | 96.91 | 96.91 |
| TraesCS7B01G003800.1 | Wheat | golgi, peroxisome, plasma membrane | 95.53 | 96.19 |
| HORVU5Hr1G125600.1 | Barley | golgi, peroxisome, plasma membrane | 95.53 | 95.53 |
| TraesCS5D01G548900.1 | Wheat | golgi, peroxisome, plasma membrane | 92.1 | 92.73 |
| TraesCS4D01G355600.1 | Wheat | golgi, peroxisome, plasma membrane | 82.13 | 81.85 |
| TraesCS5D01G561700.1 | Wheat | golgi, peroxisome, plasma membrane | 74.57 | 76.41 |
| TraesCS6D01G076400.1 | Wheat | golgi, peroxisome, plasma membrane | 76.63 | 75.59 |
| OQU91911 | Sorghum | plasma membrane | 70.79 | 73.05 |
| TraesCS2D01G206300.1 | Wheat | golgi | 70.79 | 71.03 |
| Zm00001d014285_P001 | Maize | plasma membrane | 69.07 | 71.02 |
| TraesCS5D01G112500.1 | Wheat | plasma membrane | 69.42 | 70.63 |
| Os03t0861300-01 | Rice | cytosol, peroxisome, plasma membrane | 67.35 | 70.0 |
| TraesCS6D01G212900.1 | Wheat | golgi, plasma membrane | 68.38 | 69.58 |
| TraesCS2D01G376100.1 | Wheat | plasma membrane | 69.07 | 69.31 |
| TraesCS2D01G376000.1 | Wheat | golgi | 68.73 | 68.97 |
| TraesCS2D01G063900.1 | Wheat | plasma membrane | 65.64 | 67.25 |
| TraesCS5D01G338200.1 | Wheat | plasma membrane | 61.17 | 61.17 |
| TraesCS6D01G227500.1 | Wheat | golgi | 59.45 | 59.66 |
| TraesCS6D01G389500.1 | Wheat | plasma membrane | 59.45 | 59.25 |
| TraesCS6D01G389400.1 | Wheat | plasma membrane | 59.11 | 58.9 |
| TraesCS5D01G185400.1 | Wheat | plasma membrane | 58.76 | 58.56 |
| TraesCS7D01G192200.1 | Wheat | golgi, peroxisome, plasma membrane | 53.26 | 50.99 |
| TraesCS2D01G404800.2 | Wheat | golgi, peroxisome, plasma membrane | 54.64 | 50.64 |
| TraesCS6D01G232100.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 30.93 | 36.14 |
| TraesCS2D01G411400.1 | Wheat | plasma membrane | 30.58 | 35.89 |
| TraesCS3D01G540900.1 | Wheat | plasma membrane | 30.58 | 35.32 |
| TraesCS4D01G308800.1 | Wheat | golgi, plasma membrane, vacuole | 30.58 | 34.63 |
| TraesCS2D01G370800.1 | Wheat | plasma membrane | 31.27 | 34.34 |
| TraesCS3D01G163400.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 28.87 | 34.15 |
| TraesCS7D01G339600.1 | Wheat | plasma membrane | 31.62 | 32.97 |
| TraesCS1D01G175200.1 | Wheat | unclear | 28.87 | 31.94 |
| TraesCS2D01G411500.1 | Wheat | endoplasmic reticulum | 28.18 | 31.3 |
| TraesCS4D01G344300.1 | Wheat | plasma membrane | 25.77 | 29.41 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.2 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0055085 |
| InterPro:IPR023271 | InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 | PRINTS:PR00783 | ScanProsite:PS00221 |
| PANTHER:PTHR19139 | PANTHER:PTHR19139:SF163 | SUPFAM:SSF81338 | TIGRFAMs:TIGR00861 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS5D01G560400 |
| EnsemblPlants:TraesCS5D01G560400.1 | TIGR:cd00333 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr5D:-:561572197..561573072
Molecular Weight (calculated)
30461.0 Da
IEP (calculated)
8.305
GRAVY (calculated)
0.509
Length
291 amino acids
Sequence
(BLAST)
(BLAST)
001: MPMAPAQGKL SPEAIDNEVI SNGSAKDYLD PPPAPLVDAG ELGKWSLYRA VIAEFTATLL FVYVAVATVV GHKRQTDAQA CSGAGVLGIA WAFGGTIAVL
101: VYCTAGISGG HINPAVTFGL LLARKVSLPR AFLYMVAQCV GAICGAALVR AVHGGHHYTL YGGGANELAP GYSRTAGLIA EIAGTFVLVY TVFSATDPKR
201: IARDPHVPVL APLLIGFAVL MAHLATIPVT GTGINPARSF GAAVVYNGGK AWDDQWIFWV GPFIGAAVAM VYHQYILRNS SIFRSNYDAA V
101: VYCTAGISGG HINPAVTFGL LLARKVSLPR AFLYMVAQCV GAICGAALVR AVHGGHHYTL YGGGANELAP GYSRTAGLIA EIAGTFVLVY TVFSATDPKR
201: IARDPHVPVL APLLIGFAVL MAHLATIPVT GTGINPARSF GAAVVYNGGK AWDDQWIFWV GPFIGAAVAM VYHQYILRNS SIFRSNYDAA V
001: MRALTIAIVS LYKQLSFVSS VFTNTTYPQY KTQLSYITKK VIEMAKDVEG PEGFQTRDYE DPPPTPFFDA DELTKWSLYR AVIAEFVATL LFLYITVLTV
101: IGYKIQSDTK AGGVDCGGVG ILGIAWAFGG MIFILVYCTA GISGGHINPA VTFGLFLARK VSLIRAVLYM VAQCLGAICG VGFVKAFQSS YYDRYGGGAN
201: SLADGYNTGT GLAAEIIGTF VLVYTVFSAT DPKRNARDSH VPVLAPLPIG FAVFMVHLAT IPITGTGINP ARSFGAAVIY NKSKPWDDHW IFWVGPFIGA
301: AIAAFYHQFV LRASGSKSLG SFRSAANV
101: IGYKIQSDTK AGGVDCGGVG ILGIAWAFGG MIFILVYCTA GISGGHINPA VTFGLFLARK VSLIRAVLYM VAQCLGAICG VGFVKAFQSS YYDRYGGGAN
201: SLADGYNTGT GLAAEIIGTF VLVYTVFSAT DPKRNARDSH VPVLAPLPIG FAVFMVHLAT IPITGTGINP ARSFGAAVIY NKSKPWDDHW IFWVGPFIGA
301: AIAAFYHQFV LRASGSKSLG SFRSAANV
Arabidopsis Description
PIP2Bplasma membrane intrinsic protein 2 [Source:TAIR;Acc:AT2G37170]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.