Skip to main content
crop-pal logo
Field mustard
Search for another protein from :
Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 1
  • cytosol 1
  • plasma membrane 4
  • extracellular 1
  • golgi 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:nucleus
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra006997.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G53420.1 Bra006997.1-P AT3G53420.1 19258017
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX78177 Canola plasma membrane 100.0 100.0
CDY56697 Canola plasma membrane 99.65 99.65
AT3G53420.1 Thale cress plasma membrane 94.08 94.08
Bra023103.1-P Field mustard plasma membrane 91.64 92.28
Bra005216.1-P Field mustard cytosol, golgi, plasma membrane 74.22 92.21
Bra023102.1-P Field mustard plasma membrane 90.24 91.52
Bra005215.1-P Field mustard cytosol, peroxisome, plasma membrane 74.91 90.34
Bra006650.1-P Field mustard plasma membrane 82.23 82.81
Bra020238.1-P Field mustard plasma membrane 81.18 82.33
PGSC0003DMT400027154 Potato plasma membrane 80.14 81.85
Solyc10g084120.1.1 Tomato nucleus 80.14 81.85
Os07t0448800-01 Rice plasma membrane 82.23 81.38
Bra002462.1-P Field mustard cytosol 73.52 81.15
EER98451 Sorghum plasma membrane 81.88 81.03
TraesCS2A01G198500.1 Wheat plasma membrane 81.53 80.69
TraesCS2B01G225900.1 Wheat golgi 81.18 80.34
TraesCS2D01G206300.1 Wheat golgi 81.18 80.34
Zm00001d019563_P006 Maize plasma membrane 81.18 80.34
Bra007100.1-P Field mustard plasma membrane 78.4 78.67
Zm00001d005421_P001 Maize plasma membrane 79.44 78.08
Bra003196.1-P Field mustard plasma membrane 77.7 77.97
Bra017697.1-P Field mustard cytosol 76.31 77.94
Bra011585.1-P Field mustard plasma membrane 75.96 77.58
Bra034675.1-P Field mustard cytosol, peroxisome, plasma membrane 74.22 75.8
Bra000111.1-P Field mustard plasma membrane 75.96 75.69
HORVU2Hr1G038740.1 Barley golgi, mitochondrion, plasma membrane 81.53 68.62
Bra032644.1-P Field mustard plasma membrane 67.94 68.18
Bra033248.1-P Field mustard cytosol, peroxisome, plasma membrane 67.94 68.18
Bra000974.1-P Field mustard cytosol, peroxisome, plasma membrane 68.29 68.06
Bra007603.1-P Field mustard plasma membrane 66.9 67.13
Bra019307.1-P Field mustard cytosol, peroxisome, plasma membrane 66.9 66.9
Bra004950.1-P Field mustard cytosol, peroxisome, plasma membrane 66.55 66.78
Bra014437.1-P Field mustard plasma membrane 66.55 66.78
Bra039301.1-P Field mustard cytosol, peroxisome, plasma membrane 58.19 59.64
Bra027181.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 33.8 39.11
Bra001626.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 33.45 38.55
Bra021171.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 27.53 37.62
Bra037415.1-P Field mustard cytosol 32.4 36.9
Bra032937.1-P Field mustard plasma membrane 32.4 36.76
Bra025210.1-P Field mustard plasma membrane 32.06 36.36
Bra022131.1-P Field mustard extracellular 25.78 36.27
Bra026245.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 31.36 36.0
Bra024943.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 31.01 35.46
Bra034271.1-P Field mustard cytosol, plasma membrane, vacuole 30.66 35.34
Bra008079.1-P Field mustard golgi, mitochondrion, plasma membrane 32.4 34.96
Bra017222.1-P Field mustard cytosol 30.31 34.66
Bra016014.1-P Field mustard cytosol 31.36 33.96
Bra025947.1-P Field mustard cytosol, golgi, plasma membrane 31.36 33.71
Bra031005.1-P Field mustard golgi, mitochondrion, plasma membrane 30.31 32.58
Bra018148.1-P Field mustard extracellular, plasma membrane, plastid 25.44 28.63
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.2InterPro:Aquaporin-likeInterPro:Aquaporin_transptrEnsemblPlantsGene:Bra006997EnsemblPlants:Bra006997.1
EnsemblPlants:Bra006997.1-PGO:GO:0003674GO:GO:0003676GO:GO:0003723GO:GO:0003729GO:GO:0005215
GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005773GO:GO:0005886GO:GO:0006810GO:GO:0006833GO:GO:0006950GO:GO:0008150
GO:GO:0009414GO:GO:0009506GO:GO:0009507GO:GO:0009536GO:GO:0009628GO:GO:0009719
GO:GO:0009737GO:GO:0015250GO:GO:0015267GO:GO:0016020GO:GO:0016021GO:GO:0031625
GO:GO:0055085GO:GO:0080170InterPro:IPR023271UniProt:M4CS05InterPro:MIPInterPro:MIP_CS
PFAM:PF00230PRINTS:PR00783ScanProsite:PS00221PANTHER:PTHR19139PANTHER:PTHR19139:SF260SUPFAM:SSF81338
TIGRFAMs:TIGR00861TMHMM:TMhelixUniParc:UPI00000ACB8ESEG:seg::
Description
AT3G53420 (E=1e-147) PIP2A, PIP2, PIP2;1 | PIP2A (PLASMA MEMBRANE INTRINSIC PROTEIN 2A); water channel
Coordinates
chrA09:-:26735236..26736820
Molecular Weight (calculated)
30405.9 Da
IEP (calculated)
7.956
GRAVY (calculated)
0.571
Length
287 amino acids
Sequence
(BLAST)
001: MAKDVEAVSG EGFQTRDYQD PPPAPLFDPA ELTKWSFYRA VIAEFVATLL FLYITVLTVI GYKIQTDSTA GGVDCGGVGI LGIAWAFGGM IFILVYCTAG
101: ISGGHINPAV TFGLLLARKV SLVRAILYMV AQCLGAICGV GFVKAFQSSY YVRYGGGANS LADGYSTGTG LAAEIIGTFV LVYTVFSATD PKRSARDSHV
201: PVLAPLPIGF AVFMVHLATI PITGTGINPA RSFGAAVIFN ESKPWDDHWI FWVGPFVGAA IAAFYHQFVL RASGSKSLGS FRSAANV
Best Arabidopsis Sequence Match ( AT3G53420.2 )
(BLAST)
001: MAKDVEAVPG EGFQTRDYQD PPPAPFIDGA ELKKWSFYRA VIAEFVATLL FLYITVLTVI GYKIQSDTDA GGVDCGGVGI LGIAWAFGGM IFILVYCTAG
101: ISGGHINPAV TFGLFLARKV SLPRALLYII AQCLGAICGV GFVKAFQSSY YTRYGGGANS LADGYSTGTG LAAEIIGTFV LVYTVFSATD PKRSARDSHV
201: PVLAPLPIGF AVFMVHLATI PITGTGINPA RSFGAAVIYN KSKPWDDHWI FWVGPFIGAA IAAFYHQFVL RASGSKSLGS FRSAANV
Arabidopsis Description
PIP2-1PIP2A [Source:UniProtKB/TrEMBL;Acc:A0A178V8P4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.