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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 1
  • cytosol 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:nucleus
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX89115 Canola plasma membrane 77.62 98.67
CDX71738 Canola plasma membrane 98.25 98.25
CDY66913 Canola cytosol, mitochondrion, nucleus 15.73 97.83
CDY66912 Canola extracellular 70.28 97.57
AT3G61430.1 Thale cress plasma membrane 97.55 97.55
Bra007603.1-P Field mustard plasma membrane 97.2 97.2
Bra004950.1-P Field mustard cytosol, peroxisome, plasma membrane 95.8 95.8
Bra032644.1-P Field mustard plasma membrane 94.06 94.06
Bra033248.1-P Field mustard cytosol, peroxisome, plasma membrane 93.71 93.71
Bra000974.1-P Field mustard cytosol, peroxisome, plasma membrane 94.06 93.4
Bra019307.1-P Field mustard cytosol, peroxisome, plasma membrane 89.51 89.2
VIT_13s0067g00220.t01 Wine grape plasma membrane 87.06 87.06
Bra039301.1-P Field mustard cytosol, peroxisome, plasma membrane 84.62 86.43
KRH59918 Soybean peroxisome 86.36 86.06
KRH66037 Soybean golgi, peroxisome, plasma membrane 84.97 85.56
PGSC0003DMT400014809 Potato peroxisome 85.66 85.37
PGSC0003DMT400000151 Potato cytosol, peroxisome, plasma membrane 84.97 85.26
Solyc01g094690.2.1 Tomato nucleus 84.97 85.26
KRH41192 Soybean endoplasmic reticulum 86.01 85.12
KRH27918 Soybean plasma membrane 84.97 84.97
Solyc08g008050.2.1 Tomato peroxisome 84.97 84.67
KRH77555 Soybean plasma membrane 84.62 84.62
PGSC0003DMT400012780 Potato cytosol, peroxisome, plasma membrane 84.62 84.03
Solyc12g056220.1.1 Tomato plastid 84.27 83.68
PGSC0003DMT400032134 Potato cytosol, peroxisome, plasma membrane 83.57 83.57
Solyc08g081190.2.1 Tomato plastid 83.57 83.57
PGSC0003DMT400053479 Potato plasma membrane 82.87 82.87
Solyc03g096290.2.1 Tomato nucleus 82.17 82.17
KRH00178 Soybean golgi, peroxisome, plasma membrane 81.82 81.53
Bra005216.1-P Field mustard cytosol, golgi, plasma membrane 55.59 68.83
Bra011585.1-P Field mustard plasma membrane 66.78 67.97
Bra034675.1-P Field mustard cytosol, peroxisome, plasma membrane 66.08 67.26
Bra023102.1-P Field mustard plasma membrane 66.08 66.78
Bra023103.1-P Field mustard plasma membrane 66.43 66.67
Bra006997.1-P Field mustard plasma membrane 66.78 66.55
Bra017697.1-P Field mustard cytosol 65.38 66.55
Bra007100.1-P Field mustard plasma membrane 66.43 66.43
Bra003196.1-P Field mustard plasma membrane 66.08 66.08
Bra002462.1-P Field mustard cytosol 59.79 65.77
TraesCS2A01G407700.2 Wheat golgi, peroxisome, plasma membrane 66.43 65.74
Bra006650.1-P Field mustard plasma membrane 65.38 65.61
Bra020238.1-P Field mustard plasma membrane 64.69 65.37
KRH75838 Soybean golgi, peroxisome, plasma membrane 82.17 64.74
Bra000111.1-P Field mustard plasma membrane 65.03 64.58
Bra005215.1-P Field mustard cytosol, peroxisome, plasma membrane 53.15 63.87
Bra027181.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 31.12 35.89
Bra001626.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 31.12 35.74
Bra021171.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 25.52 34.76
Bra037415.1-P Field mustard cytosol 30.42 34.52
Bra008079.1-P Field mustard golgi, mitochondrion, plasma membrane 31.82 34.21
Bra022131.1-P Field mustard extracellular 24.13 33.82
Bra034271.1-P Field mustard cytosol, plasma membrane, vacuole 29.37 33.73
Bra025947.1-P Field mustard cytosol, golgi, plasma membrane 31.47 33.71
Bra032937.1-P Field mustard plasma membrane 29.37 33.2
Bra026245.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 29.02 33.2
Bra017222.1-P Field mustard cytosol 29.02 33.07
Bra016014.1-P Field mustard cytosol 30.42 32.83
Bra024943.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 28.67 32.67
Bra031005.1-P Field mustard golgi, mitochondrion, plasma membrane 30.42 32.58
Bra025210.1-P Field mustard plasma membrane 28.32 32.02
Bra018148.1-P Field mustard extracellular, plasma membrane, plastid 25.87 29.02
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.2InterPro:Aquaporin-likeInterPro:Aquaporin_transptrEnsemblPlantsGene:Bra014437EnsemblPlants:Bra014437.1
EnsemblPlants:Bra014437.1-PGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0015267GO:GO:0016020GO:GO:0016021GO:GO:0055085InterPro:IPR023271UniProt:M4DD69
InterPro:MIPInterPro:MIP_CSPFAM:PF00230PRINTS:PR00783ScanProsite:PS00221PANTHER:PTHR19139
PANTHER:PTHR19139:SF202SUPFAM:SSF81338TIGRFAMs:TIGR00861TMHMM:TMhelixUniParc:UPI0002543847:
Description
AT3G61430 (E=2e-163) PIP1A, ATPIP1, PIP1, PIP1;1 | PIP1A (PLASMA MEMBRANE INTRINSIC PROTEIN 1A); water channel
Coordinates
chrA04:-:639779..641115
Molecular Weight (calculated)
30707.4 Da
IEP (calculated)
9.302
GRAVY (calculated)
0.360
Length
286 amino acids
Sequence
(BLAST)
001: MEGKEEDIRV GANKFPERQP IGTSAQSDKD YNEPPPAPLF EPGELSSWSF WRAGIAEFIA TFLFLYITVL TVMGVKRSPN MCASVGIQGI AWAFGGMIFA
101: LVYCTAGISG GHINPAVTFG LFLARKLSLT RALYYIVMQC LGAICGAGVV KGFQPKQYQA LGGGANTVAP GYTKGSGLGA EIIGTFVLVY TVFSATDAKR
201: NARDSHVPIL APLPIGFAVF LVHLATIRMT GTGINPARSL GAAIIYNKDH SWDDHWVFWV GPFIGAALAA LYHVIVIRAI PFKSRS
Best Arabidopsis Sequence Match ( AT3G61430.2 )
(BLAST)
001: MEGKEEDVRV GANKFPERQP IGTSAQSDKD YKEPPPAPFF EPGELSSWSF WRAGIAEFIA TFLFLYITVL TVMGVKRSPN MCASVGIQGI AWAFGGMIFA
101: LVYCTAGISG GHINPAVTFG LFLARKLSLT RALYYIVMQC LGAICGAGVV KGFQPKQYQA LGGGANTVAH GYTKGSGLGA EIIGTFVLVY TVFSATDAKR
201: NARDSHVPIL APLPIGFAVF LVHLATIPIT GTGINPARSL GAAIIYNKDH SWDDHWVFWV GPFIGAALAA LYHVVVIRAI PFKSRS
Arabidopsis Description
PIP1-1PIP1A [Source:UniProtKB/TrEMBL;Acc:A0A178VIZ0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.