Factsheet for Bra000111.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
cytosol 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra019307.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G39010.1	Bra019307.1-P	AT4G23400.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07681	Canola	plasma membrane	100.0	100.0
CDY14415	Canola	cytosol, peroxisome, plasma membrane	98.96	98.96
AT2G39010.1	Thale cress	plasma membrane	93.75	93.43
Bra005216.1-P	Field mustard	cytosol, golgi, plasma membrane	62.85	78.36
Bra023102.1-P	Field mustard	plasma membrane	75.69	77.03
Bra006650.1-P	Field mustard	plasma membrane	75.69	76.49
Solyc06g011350.2.1	Tomato	nucleus	73.96	76.07
Bra020238.1-P	Field mustard	plasma membrane	74.65	75.97
Bra006997.1-P	Field mustard	plasma membrane	75.69	75.96
Bra007100.1-P	Field mustard	plasma membrane	75.35	75.87
Bra017697.1-P	Field mustard	cytosol	73.96	75.8
Bra023103.1-P	Field mustard	plasma membrane	75.0	75.79
Bra003196.1-P	Field mustard	plasma membrane	75.0	75.52
PGSC0003DMT400062174	Potato	plasma membrane	75.0	75.52
Bra011585.1-P	Field mustard	plasma membrane	73.61	75.44
Bra034675.1-P	Field mustard	cytosol, peroxisome, plasma membrane	72.57	74.38
Bra002462.1-P	Field mustard	cytosol	67.01	74.23
Bra005215.1-P	Field mustard	cytosol, peroxisome, plasma membrane	61.11	73.95
PGSC0003DMT400020870	Potato	plasma membrane	72.92	73.17
Solyc11g069430.1.1	Tomato	plastid	72.92	73.17
Bra032644.1-P	Field mustard	plasma membrane	65.62	66.08
Bra019307.1-P	Field mustard	cytosol, peroxisome, plasma membrane	65.62	65.85
Bra033248.1-P	Field mustard	cytosol, peroxisome, plasma membrane	65.28	65.73
Bra014437.1-P	Field mustard	plasma membrane	64.58	65.03
Bra007603.1-P	Field mustard	plasma membrane	64.58	65.03
Bra004950.1-P	Field mustard	cytosol, peroxisome, plasma membrane	64.58	65.03
Bra000974.1-P	Field mustard	cytosol, peroxisome, plasma membrane	64.93	64.93
Bra039301.1-P	Field mustard	cytosol, peroxisome, plasma membrane	56.25	57.86
Bra021171.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	28.47	39.05
Bra027181.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	32.99	38.31
Bra001626.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	32.99	38.15
Bra037415.1-P	Field mustard	cytosol	31.94	36.51
Bra022131.1-P	Field mustard	extracellular	25.69	36.27
Bra024943.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	31.6	36.26
Bra026245.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	31.25	36.0
Bra025210.1-P	Field mustard	plasma membrane	31.6	35.97
Bra032937.1-P	Field mustard	plasma membrane	30.9	35.18
Bra017222.1-P	Field mustard	cytosol	30.21	34.66
Bra008079.1-P	Field mustard	golgi, mitochondrion, plasma membrane	30.9	33.46
Bra016014.1-P	Field mustard	cytosol	29.51	32.08
Bra025947.1-P	Field mustard	cytosol, golgi, plasma membrane	29.51	31.84
Bra034271.1-P	Field mustard	cytosol, plasma membrane, vacuole	27.43	31.73
Bra031005.1-P	Field mustard	golgi, mitochondrion, plasma membrane	28.12	30.34
Bra018148.1-P	Field mustard	extracellular, plasma membrane, plastid	25.35	28.63

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.2	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	EnsemblPlantsGene:Bra000111	EnsemblPlants:Bra000111.1
EnsemblPlants:Bra000111.1-P	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006810	GO:GO:0008150	GO:GO:0009605	GO:GO:0009607	GO:GO:0009624	GO:GO:0015267
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR023271	UniProt:M4C7D3	InterPro:MIP
InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF167
SUPFAM:SSF81338	TIGRFAMs:TIGR00861	TMHMM:TMhelix	UniParc:UPI0000EC7D7B	SEG:seg	:

Description

AT2G39010 (E=3e-149) PIP2E, PIP2;6 | PIP2E (PLASMA MEMBRANE INTRINSIC PROTEIN 2E); water channel

Coordinates

chrA03:+:9304457..9307238

Molecular Weight (calculated)

30867.5 Da

IEP (calculated)

8.564

GRAVY (calculated)

0.481

Length

288 amino acids

Sequence
(BLAST)

001: MSTDLTEEES LSGKDYQDPP RVKIFEAREL GKWSFYRAVI AEFIATLLFL YVTVLTVIGF KSQTDLQTGG GACASVGLLG ISWAFGGMIF ILVYCTAGIS
101: GGHINPAVTF GLFLASKVSL VRAISYIVAQ CLGATCGVGL VKVFQKTYYN RYGGGANVLA DGYNVGVGVG AEIIGTFVLV YTVFSATDPK RNARDSHIPV
201: LAPLPIGFSV FMVHLATIPI TGTGINPARS FGAAVIYNNQ KAWDDQWIFW VGPFVGAAIA ALYHQFVLRA GAMKAYGSVR SQLHELHA

Best Arabidopsis Sequence Match ( AT2G39010.1 )
(BLAST)

001: MTKDELTEEE SLSGKDYLDP PPVKTFEVRE LKKWSFYRAV IAEFIATLLF LYVTVLTVIG FKSQTDINAG GGACASVGLL GISWAFGGMI FILVYCTAGI
101: SGGHINPAVT FGLFLASKVS LVRAVSYMVA QCLGATCGVG LVKVFQSTYY NRYGGGANML SDGYNVGVGV GAEIIGTFVL VYTVFSATDP KRNARDSHIP
201: VLAPLPIGFS VFMVHLATIP ITGTGINPAR SFGAAVIYNN QKAWDDQWIF WVGPFVGAAI AAFYHQFVLR AGAMKAYGSV RSQLHELHA

Arabidopsis Description

PIP2-6Probable aquaporin PIP2-6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZV07]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.