Factsheet for Bra005216.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, cytosol

Predictor Summary:

nucleus 1
plastid 1
golgi 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003196.1-P
Bra007100.1-P
Bra007603.1-P
Bra011585.1-P
Bra014437.1-P
Bra017697.1-P
Bra019307.1-P
Bra027174.1-P
Bra034675.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G37180.1	Bra027174.1-P	AT3G16310.1	21798944
AT2G37180.1	Bra003196.1-P	AT3G54820.1	21798944
AT2G37180.1	Bra007100.1-P	AT3G54820.1	21798944
AT2G37180.1	Bra007603.1-P	AT3G61430.1	21798944
AT2G37180.1	Bra014437.1-P	AT3G61430.1	21798944
AT2G37180.1	Bra019307.1-P	AT4G23400.1	21798944
AT2G37180.1	Bra011585.1-P	AT4G35100.1	21798944
AT2G37180.1	Bra017697.1-P	AT4G35100.1	21798944
AT2G37180.1	Bra034675.1-P	AT4G35100.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023102.1-P	Field mustard	plasma membrane	96.54	78.8
Bra023103.1-P	Field mustard	plasma membrane	95.67	77.54
Bra005215.1-P	Field mustard	cytosol, peroxisome, plasma membrane	77.49	75.21
AT2G37180.1	Thale cress	plasma membrane	92.21	74.74
Bra006997.1-P	Field mustard	plasma membrane	92.21	74.22
Bra002462.1-P	Field mustard	cytosol	82.68	73.46
CDX74984	Canola	cytosol, peroxisome, plasma membrane	97.84	72.9
Bra006650.1-P	Field mustard	plasma membrane	83.12	67.37
PGSC0003DMT400027154	Potato	plasma membrane	81.82	67.26
Bra020238.1-P	Field mustard	plasma membrane	81.82	66.78
EER98451	Sorghum	plasma membrane	83.55	66.55
Solyc10g084120.1.1	Tomato	nucleus	80.95	66.55
Zm00001d019563_P006	Maize	plasma membrane	83.12	66.21
AT2G37170.2	Thale cress	plasma membrane	93.94	66.16
Os07t0448800-01	Rice	plasma membrane	82.68	65.86
TraesCS2A01G198500.1	Wheat	plasma membrane	82.68	65.86
TraesCS2D01G206300.1	Wheat	golgi	82.25	65.52
TraesCS2B01G225900.1	Wheat	golgi	82.25	65.52
Zm00001d005421_P001	Maize	plasma membrane	81.82	64.73
Bra011585.1-P	Field mustard	plasma membrane	77.49	63.7
Bra007100.1-P	Field mustard	plasma membrane	78.79	63.64
Bra003196.1-P	Field mustard	plasma membrane	78.36	63.29
Bra017697.1-P	Field mustard	cytosol	76.62	62.99
Bra000111.1-P	Field mustard	plasma membrane	78.36	62.85
Bra034675.1-P	Field mustard	cytosol, peroxisome, plasma membrane	75.76	62.28
Bra004950.1-P	Field mustard	cytosol, peroxisome, plasma membrane	69.7	56.29
Bra033248.1-P	Field mustard	cytosol, peroxisome, plasma membrane	69.7	56.29
Bra000974.1-P	Field mustard	cytosol, peroxisome, plasma membrane	70.13	56.25
HORVU2Hr1G038740.1	Barley	golgi, mitochondrion, plasma membrane	82.68	56.01
Bra007603.1-P	Field mustard	plasma membrane	69.26	55.94
Bra032644.1-P	Field mustard	plasma membrane	69.26	55.94
Bra014437.1-P	Field mustard	plasma membrane	68.83	55.59
Bra019307.1-P	Field mustard	cytosol, peroxisome, plasma membrane	68.83	55.4
Bra039301.1-P	Field mustard	cytosol, peroxisome, plasma membrane	57.14	47.14
Bra021171.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	33.77	37.14
Bra022131.1-P	Field mustard	extracellular	30.74	34.8
Bra037415.1-P	Field mustard	cytosol	36.8	33.73
Bra027181.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	35.5	33.06
Bra001626.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	35.06	32.53
Bra032937.1-P	Field mustard	plasma membrane	34.63	31.62
Bra025210.1-P	Field mustard	plasma membrane	33.77	30.83
Bra008079.1-P	Field mustard	golgi, mitochondrion, plasma membrane	35.5	30.83
Bra034271.1-P	Field mustard	cytosol, plasma membrane, vacuole	32.9	30.52
Bra016014.1-P	Field mustard	cytosol	34.63	30.19
Bra017222.1-P	Field mustard	cytosol	32.47	29.88
Bra025947.1-P	Field mustard	cytosol, golgi, plasma membrane	34.2	29.59
Bra024943.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	31.6	29.08
Bra026245.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	31.17	28.8
Bra031005.1-P	Field mustard	golgi, mitochondrion, plasma membrane	32.47	28.09
Bra018148.1-P	Field mustard	extracellular, plasma membrane, plastid	26.84	24.31

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.2	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	EnsemblPlantsGene:Bra005216	EnsemblPlants:Bra005216.1
EnsemblPlants:Bra005216.1-P	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR023271	UniProt:M4CLX9
InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139
PANTHER:PTHR19139:SF260	SUPFAM:SSF81338	TIGRFAMs:TIGR00861	TMHMM:TMhelix	UniParc:UPI0002547A8E	:

Description

AT2G37170 (E=2e-124) PIP2B, PIP2;2 | PIP2B (PLASMA MEMBRANE INTRINSIC PROTEIN 2); water channel

Coordinates

chrA05:+:4071511..4072570

Molecular Weight (calculated)

24272.4 Da

IEP (calculated)

9.130

GRAVY (calculated)

0.545

Length

231 amino acids

Sequence
(BLAST)

001: MRRADQVISS DTKAGGDECG GVGILGISWA FGGMIFILVY CTAGISGGHI NPAVTFGLFL ARKVSLVRAV LYMVAQCLGA ICGVGFVKAF QSAYYVRYGG
101: GANSLADGYS TGTGLAAEII GTFVLVYTVF SATDPKRNAR DSHVPVLAPL PIGFAVFMVH LATIPITGTG INPARSFGAA VIYNESKPWD DHWIFWVGPF
201: IGAAIAAFYH QFVLRASGSK SLGSFRSAAN V

Best Arabidopsis Sequence Match ( AT2G37170.1 )
(BLAST)

001: MAKDVEGPEG FQTRDYEDPP PTPFFDADEL TKWSLYRAVI AEFVATLLFL YITVLTVIGY KIQSDTKAGG VDCGGVGILG IAWAFGGMIF ILVYCTAGIS
101: GGHINPAVTF GLFLARKVSL IRAVLYMVAQ CLGAICGVGF VKAFQSSYYD RYGGGANSLA DGYNTGTGLA AEIIGTFVLV YTVFSATDPK RNARDSHVPV
201: LAPLPIGFAV FMVHLATIPI TGTGINPARS FGAAVIYNKS KPWDDHWIFW VGPFIGAAIA AFYHQFVLRA SGSKSLGSFR SAANV

Arabidopsis Description

PIP2Bplasma membrane intrinsic protein 2 [Source:TAIR;Acc:AT2G37170]
SUBAcon: [peroxisome,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.