Factsheet for Bra023103.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
cytosol 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003196.1-P
Bra007100.1-P
Bra007603.1-P
Bra011585.1-P
Bra014437.1-P
Bra017697.1-P
Bra019307.1-P
Bra027174.1-P
Bra034675.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G37180.1	Bra027174.1-P	AT3G16310.1	21798944
AT2G37180.1	Bra003196.1-P	AT3G54820.1	21798944
AT2G37180.1	Bra007100.1-P	AT3G54820.1	21798944
AT2G37180.1	Bra007603.1-P	AT3G61430.1	21798944
AT2G37180.1	Bra014437.1-P	AT3G61430.1	21798944
AT2G37180.1	Bra019307.1-P	AT4G23400.1	21798944
AT2G37180.1	Bra011585.1-P	AT4G35100.1	21798944
AT2G37180.1	Bra017697.1-P	AT4G35100.1	21798944
AT2G37180.1	Bra034675.1-P	AT4G35100.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY46759	Canola	plasma membrane	98.25	98.25
Bra005215.1-P	Field mustard	cytosol, peroxisome, plasma membrane	81.05	97.06
Bra023102.1-P	Field mustard	plasma membrane	95.79	96.47
Bra005216.1-P	Field mustard	cytosol, golgi, plasma membrane	77.54	95.67
AT2G37180.1	Thale cress	plasma membrane	92.98	92.98
Bra006997.1-P	Field mustard	plasma membrane	92.28	91.64
Bra006650.1-P	Field mustard	plasma membrane	82.81	82.81
Bra020238.1-P	Field mustard	plasma membrane	81.75	82.33
EER98451	Sorghum	plasma membrane	83.51	82.07
PGSC0003DMT400027154	Potato	plasma membrane	80.7	81.85
AT2G37170.2	Thale cress	plasma membrane	94.04	81.71
Zm00001d019563_P006	Maize	plasma membrane	82.81	81.38
Bra002462.1-P	Field mustard	cytosol	74.04	81.15
Solyc10g084120.1.1	Tomato	nucleus	80.0	81.14
TraesCS2A01G198500.1	Wheat	plasma membrane	82.46	81.03
TraesCS2D01G206300.1	Wheat	golgi	82.11	80.69
TraesCS2B01G225900.1	Wheat	golgi	82.11	80.69
Os07t0448800-01	Rice	plasma membrane	81.75	80.34
Zm00001d005421_P001	Maize	plasma membrane	82.11	80.14
Bra003196.1-P	Field mustard	plasma membrane	78.25	77.97
Bra007100.1-P	Field mustard	plasma membrane	77.89	77.62
Bra011585.1-P	Field mustard	plasma membrane	74.74	75.8
Bra017697.1-P	Field mustard	cytosol	74.39	75.44
Bra000111.1-P	Field mustard	plasma membrane	75.79	75.0
Bra034675.1-P	Field mustard	cytosol, peroxisome, plasma membrane	73.68	74.73
HORVU2Hr1G038740.1	Barley	golgi, mitochondrion, plasma membrane	82.46	68.92
Bra007603.1-P	Field mustard	plasma membrane	67.02	66.78
Bra019307.1-P	Field mustard	cytosol, peroxisome, plasma membrane	67.02	66.55
Bra014437.1-P	Field mustard	plasma membrane	66.67	66.43
Bra033248.1-P	Field mustard	cytosol, peroxisome, plasma membrane	66.67	66.43
Bra000974.1-P	Field mustard	cytosol, peroxisome, plasma membrane	67.02	66.32
Bra032644.1-P	Field mustard	plasma membrane	66.32	66.08
Bra004950.1-P	Field mustard	cytosol, peroxisome, plasma membrane	65.96	65.73
Bra039301.1-P	Field mustard	cytosol, peroxisome, plasma membrane	56.49	57.5
Bra027181.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	33.68	38.71
Bra001626.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	33.33	38.15
Bra021171.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	28.07	38.1
Bra037415.1-P	Field mustard	cytosol	32.63	36.9
Bra032937.1-P	Field mustard	plasma membrane	32.63	36.76
Bra022131.1-P	Field mustard	extracellular	25.96	36.27
Bra025210.1-P	Field mustard	plasma membrane	31.58	35.57
Bra024943.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	30.88	35.06
Bra026245.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	30.53	34.8
Bra034271.1-P	Field mustard	cytosol, plasma membrane, vacuole	30.18	34.54
Bra017222.1-P	Field mustard	cytosol	29.82	33.86
Bra008079.1-P	Field mustard	golgi, mitochondrion, plasma membrane	31.58	33.83
Bra016014.1-P	Field mustard	cytosol	30.53	32.83
Bra025947.1-P	Field mustard	cytosol, golgi, plasma membrane	30.53	32.58
Bra031005.1-P	Field mustard	golgi, mitochondrion, plasma membrane	29.47	31.46
Bra018148.1-P	Field mustard	extracellular, plasma membrane, plastid	24.56	27.45

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.2	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	EnsemblPlantsGene:Bra023103	EnsemblPlants:Bra023103.1
EnsemblPlants:Bra023103.1-P	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR023271	UniProt:M4E2V2
InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139
PANTHER:PTHR19139:SF260	SUPFAM:SSF81338	TIGRFAMs:TIGR00861	TMHMM:TMhelix	UniParc:UPI0001B34E69	SEG:seg

Description

AT2G37170 (E=5e-140) PIP2B, PIP2;2 | PIP2B (PLASMA MEMBRANE INTRINSIC PROTEIN 2); water channel

Coordinates

chrA03:+:8706382..8707546

Molecular Weight (calculated)

30270.6 Da

IEP (calculated)

7.493

GRAVY (calculated)

0.562

Length

285 amino acids

Sequence
(BLAST)

001: MAKDVEGAEG FAARDYQDPP PTPFFDAEEL TRWSLYRAVI AEFVATLLFL YVTVLTVIGY KISSDTTAGG VECGGVGILG IAWAFGGMIF ILVYCTAGIS
101: GGHINPAVTF GLFLARKVTL VRALLYMVAQ CLGAICGVGF VKAFQSAYYV RYGGGANSLA DGYSTGTGLA AEIIGTFVLV YTVFSATDPK RNARDSHVPV
201: LAPLPIGFAV FMVHLATIPI TGTGINPARS FGAAVIYNES KPWDDHWIFW VGPFIGAAIA AFYHQFVLRA SGSKSLGSFR SAANV

Best Arabidopsis Sequence Match ( AT2G37170.2 )
(BLAST)

001: MRALTIAIVS LYKQLSFVSS VFTNTTYPQY KTQLSYITKK VIEMAKDVEG PEGFQTRDYE DPPPTPFFDA DELTKWSLYR AVIAEFVATL LFLYITVLTV
101: IGYKIQSDTK AGGVDCGGVG ILGIAWAFGG MIFILVYCTA GISGGHINPA VTFGLFLARK VSLIRAVLYM VAQCLGAICG VGFVKAFQSS YYDRYGGGAN
201: SLADGYNTGT GLAAEIIGTF VLVYTVFSAT DPKRNARDSH VPVLAPLPIG FAVFMVHLAT IPITGTGINP ARSFGAAVIY NKSKPWDDHW IFWVGPFIGA
301: AIAAFYHQFV LRASGSKSLG SFRSAANV

Arabidopsis Description

PIP2Bplasma membrane intrinsic protein 2 [Source:TAIR;Acc:AT2G37170]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.