Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra002462.1-P Field mustard cytosol 98.84 98.46
CDY31523 Canola plasma membrane 98.46 98.08
CDX71032 Canola plasma membrane 96.14 95.77
CDX88767 Canola plasma membrane 95.75 95.38
CDY09192 Canola plasma membrane 94.21 94.21
CDY70391 Canola extracellular, golgi 51.74 84.28
AT5G60660.1 Thale cress plasma membrane 90.35 80.41
CDY46758 Canola plasma membrane 81.47 74.56
CDY66912 Canola extracellular 59.07 74.27
CDX91341 Canola plasma membrane 81.08 73.68
CDX91340 Canola plasma membrane 81.08 73.68
CDY46759 Canola plasma membrane 80.69 73.33
CDY56697 Canola plasma membrane 81.08 73.17
CDX78177 Canola plasma membrane 80.69 72.82
CDY13298 Canola plasma membrane 80.31 72.47
CDY17511 Canola plasma membrane 77.61 71.53
CDY52648 Canola plasma membrane 77.61 71.53
CDX76314 Canola cytosol 77.22 71.17
CDX69112 Canola plasma membrane 77.22 71.17
CDX74983 Canola cytosol, peroxisome, plasma membrane 53.67 70.56
CDX72515 Canola golgi, plasma membrane 68.73 70.08
CDX89115 Canola plasma membrane 59.85 68.89
CDX67611 Canola plasma membrane 74.9 67.83
CDY07519 Canola plasma membrane 74.9 67.83
CDX74984 Canola cytosol, peroxisome, plasma membrane 81.08 67.74
CDX78265 Canola plasma membrane 73.75 66.78
CDX73446 Canola peroxisome 73.36 66.43
CDY07681 Canola plasma membrane 73.75 66.32
CDY14415 Canola cytosol, peroxisome, plasma membrane 72.97 65.62
TraesCS5A01G332300.1 Wheat plasma membrane 69.5 61.86
TraesCS5B01G332500.1 Wheat plasma membrane 68.73 61.17
TraesCS5D01G338200.1 Wheat plasma membrane 68.73 61.17
Os09t0541000-01 Rice cytosol, plasma membrane, vacuole 68.34 61.03
CDX94185 Canola plasma membrane 67.18 60.63
CDY10936 Canola plasma membrane 67.18 60.63
Zm00001d022608_P001 Maize plasma membrane 67.18 60.42
CDY38017 Canola plasma membrane 66.41 60.14
CDX90046 Canola cytosol, peroxisome, plasma membrane 66.41 60.14
CDX95670 Canola cytosol, peroxisome, plasma membrane 66.02 59.79
CDY51161 Canola cytosol, peroxisome, plasma membrane 65.64 59.44
CDX83385 Canola cytosol, peroxisome, plasma membrane 65.64 59.44
CDY37078 Canola cytosol, peroxisome, plasma membrane 65.64 59.44
CDX74777 Canola cytosol, peroxisome, plasma membrane 65.64 59.44
CDY27346 Canola cytosol, peroxisome, plasma membrane 65.64 59.44
CDY18886 Canola cytosol, peroxisome, plasma membrane 65.64 59.44
CDY48920 Canola plasma membrane 65.25 59.09
CDX71738 Canola plasma membrane 65.25 59.09
CDY07221 Canola cytosol, peroxisome, plasma membrane 65.25 59.09
CDX74334 Canola cytosol, peroxisome, plasma membrane 65.64 59.03
CDX91911 Canola cytosol, peroxisome, plasma membrane 65.25 58.68
HORVU5Hr1G084230.1 Barley extracellular, golgi, mitochondrion 69.11 57.56
CDY15165 Canola plastid 66.41 53.09
TraesCS7B01G096000.1 Wheat golgi, peroxisome, plasma membrane 61.39 52.3
TraesCS4A01G286200.1 Wheat golgi, peroxisome, plasma membrane 61.0 51.97
TraesCS7A01G191200.1 Wheat golgi, peroxisome, plasma membrane 61.0 51.97
TraesCS7D01G192200.1 Wheat golgi, peroxisome, plasma membrane 60.62 51.64
TraesCS4B01G027600.1 Wheat plasma membrane 53.67 47.77
KXG36091 Sorghum cytosol, peroxisome, plasma membrane 52.12 41.41
HORVU7Hr1G038940.1 Barley golgi 31.66 40.2
CDY28932 Canola endoplasmic reticulum, extracellular, vacuole 28.96 35.71
CDY07142 Canola cytosol 33.2 34.13
CDY69446 Canola cytosol 33.2 34.13
CDY67380 Canola plastid 28.96 33.94
CDY66645 Canola plastid 28.96 33.94
CDY30146 Canola endoplasmic reticulum, extracellular, plasma membrane 32.43 33.87
CDX97733 Canola endoplasmic reticulum, extracellular 32.43 33.87
CDY20190 Canola endoplasmic reticulum, plasma membrane, vacuole 32.43 33.73
CDY63821 Canola endoplasmic reticulum, plasma membrane, vacuole 32.43 33.73
CDX82410 Canola plasma membrane 32.05 33.33
CDY48983 Canola plasma membrane 31.27 32.02
CDY13639 Canola plasma membrane 31.27 32.02
CDY28539 Canola plasma membrane 31.27 32.02
CDX83623 Canola golgi, plasma membrane, plastid 31.27 32.02
CDY66321 Canola plasma membrane 32.82 31.95
CDY51678 Canola plasma membrane, vacuole 30.5 31.6
CDX77768 Canola endoplasmic reticulum, plasma membrane, vacuole 30.5 31.47
CDY59296 Canola endoplasmic reticulum, plasma membrane, vacuole 30.5 31.47
CDY53270 Canola plasma membrane 30.5 31.47
CDY35336 Canola extracellular 17.37 31.47
CDY47816 Canola endoplasmic reticulum, plasma membrane, vacuole 30.5 31.23
CDY48045 Canola golgi, mitochondrion, plasma membrane 32.05 31.2
CDY64499 Canola endoplasmic reticulum, plasma membrane, vacuole 30.12 31.2
CDY65121 Canola endoplasmic reticulum, plasma membrane, vacuole 30.12 31.2
CDX68239 Canola cytosol 30.89 30.19
CDY11123 Canola cytosol 30.89 30.19
CDX77009 Canola cytosol, plasma membrane, vacuole 28.96 30.12
CDY26214 Canola plasma membrane 30.89 29.96
CDX75873 Canola extracellular, golgi, vacuole 31.66 29.82
CDX96453 Canola cytosol 30.5 29.81
CDY19176 Canola plasma membrane 30.5 29.59
CDX72962 Canola plasma membrane 30.12 29.43
CDY21731 Canola golgi, mitochondrion, plasma membrane 29.34 28.46
CDX81850 Canola golgi, mitochondrion, plasma membrane 29.34 28.46
CDY47413 Canola mitochondrion, plastid 26.25 26.36
CDX99048 Canola mitochondrion, plastid 25.87 25.97
CDY66913 Canola cytosol, mitochondrion, nucleus 4.25 23.91
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.2GO:A0A078IW64UniProt:A0A078IW64InterPro:Aquaporin-likeInterPro:Aquaporin_transptr
EnsemblPlants:CDY53629ProteinID:CDY53629ProteinID:CDY53629.1GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0015267GO:GO:0016020GO:GO:0016021GO:GO:0055085
EnsemblPlantsGene:GSBRNA2T00011105001InterPro:IPR023271InterPro:MIPInterPro:MIP_CSPFAM:PF00230PRINTS:PR00783
ScanProsite:PS00221PANTHER:PTHR19139PANTHER:PTHR19139:SF260SUPFAM:SSF81338TIGRFAMs:TIGR00861TMHMM:TMhelix
UniParc:UPI0004EF462ASEG:seg::::
Description
BnaC09g53920DBnaC09g53920D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IW64]
Coordinates
chrLK033222:+:35359..36731
Molecular Weight (calculated)
27158.8 Da
IEP (calculated)
7.401
GRAVY (calculated)
0.421
Length
259 amino acids
Sequence
(BLAST)
001: MAKDLEVQEG GATAARDYVD PPPAPLLDME EFGKWSLYRA TDANAGGVDC GGVGILGIAW AFGGMIFVLV YCTAGVSGGH INPAVTFGLF LARKVSLVRT
101: VLYIVAQCLG AICGCGLVKA FQSSYYTRYG GGANELADGY NKGTGLGAEI IGTFVLVYTV FSATDPKRSA RDSHIPVLAP LPIGFAVFMV HVATIPITGT
201: GINPARSFGA AVIYNQEKAW DDQIFWVGQM IGAAAAALYH QFVLRAAGIK SLGSFRSSA
Best Arabidopsis Sequence Match ( AT2G37170.1 )
(BLAST)
001: MAKDVEGPEG FQTRDYEDPP PTPFFDADEL TKWSLYRAVI AEFVATLLFL YITVLTVIGY KIQSDTKAGG VDCGGVGILG IAWAFGGMIF ILVYCTAGIS
101: GGHINPAVTF GLFLARKVSL IRAVLYMVAQ CLGAICGVGF VKAFQSSYYD RYGGGANSLA DGYNTGTGLA AEIIGTFVLV YTVFSATDPK RNARDSHVPV
201: LAPLPIGFAV FMVHLATIPI TGTGINPARS FGAAVIYNKS KPWDDHWIFW VGPFIGAAIA AFYHQFVLRA SGSKSLGSFR SAANV
Arabidopsis Description
PIP2Bplasma membrane intrinsic protein 2 [Source:TAIR;Acc:AT2G37170]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.