Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69446 | Canola | cytosol | 96.83 | 96.83 |
| CDY07142 | Canola | cytosol | 96.83 | 96.83 |
| Bra037415.1-P | Field mustard | cytosol | 96.83 | 96.83 |
| KRH70511 | Soybean | cytosol | 84.52 | 84.52 |
| KRH01591 | Soybean | cytosol | 83.73 | 83.73 |
| VIT_13s0019g00330.t01 | Wine grape | cytosol, plasma membrane, vacuole | 82.14 | 82.47 |
| KRH36204 | Soybean | cytosol, extracellular, mitochondrion, plasma membrane | 80.56 | 80.56 |
| AT2G36830.1 | Thale cress | golgi, plasma membrane, vacuole | 72.22 | 72.51 |
| KRG90553 | Soybean | extracellular | 69.44 | 72.02 |
| AT3G26520.1 | Thale cress | plasma membrane | 70.24 | 69.96 |
| AT3G16240.1 | Thale cress | plasma membrane | 56.35 | 56.8 |
| AT1G17810.1 | Thale cress | cytosol, golgi, plasma membrane | 58.73 | 55.43 |
| AT1G73190.1 | Thale cress | plasma membrane | 58.73 | 55.22 |
| AT5G47450.1 | Thale cress | golgi, plasma membrane | 54.37 | 54.8 |
| AT4G17340.1 | Thale cress | golgi, plasma membrane, vacuole | 53.57 | 54.0 |
| AT2G25810.1 | Thale cress | cytosol, golgi, plasma membrane | 49.6 | 50.2 |
| AT1G52180.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 21.03 | 42.74 |
| AT3G47440.1 | Thale cress | mitochondrion, plastid | 37.3 | 36.72 |
| AT3G53420.1 | Thale cress | plasma membrane | 37.3 | 32.75 |
| AT2G16850.1 | Thale cress | plasma membrane | 35.71 | 32.37 |
| AT2G39010.1 | Thale cress | plasma membrane | 36.9 | 32.18 |
| AT3G54820.1 | Thale cress | plasma membrane | 36.51 | 32.17 |
| AT4G35100.1 | Thale cress | plasma membrane | 35.71 | 32.14 |
| AT2G37180.1 | Thale cress | plasma membrane | 36.11 | 31.93 |
| AT5G60660.1 | Thale cress | plasma membrane | 35.71 | 30.93 |
| AT3G61430.1 | Thale cress | plasma membrane | 34.92 | 30.77 |
| AT4G00430.1 | Thale cress | golgi, peroxisome, plasma membrane | 34.92 | 30.66 |
| AT1G01620.1 | Thale cress | golgi, peroxisome, plasma membrane | 34.52 | 30.42 |
| AT4G23400.1 | Thale cress | plasma membrane | 34.52 | 30.31 |
| AT2G37170.2 | Thale cress | plasma membrane | 36.51 | 28.05 |
| AT2G45960.3 | Thale cress | golgi, peroxisome, plasma membrane | 29.76 | 24.92 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.3 | EntrezGene:828051 | ProteinID:AAC62778.1 | ProteinID:AEE82031.1 | ArrayExpress:AT4G01470 |
| EnsemblPlantsGene:AT4G01470 | RefSeq:AT4G01470 | TAIR:AT4G01470 | RefSeq:AT4G01470-TAIR-G | EnsemblPlants:AT4G01470.1 | TAIR:AT4G01470.1 |
| InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | ProteinID:CAB77717.1 | EMBL:DQ446793 | EMBL:DQ653172 | Symbol:GAMMA-TIP3 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005886 | GO:GO:0005887 | GO:GO:0006810 | GO:GO:0006833 |
| GO:GO:0008150 | GO:GO:0009705 | GO:GO:0015204 | GO:GO:0015250 | GO:GO:0015267 | GO:GO:0015840 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0034220 | GO:GO:0042807 | GO:GO:0055085 | GO:GO:0071918 |
| InterPro:IPR023271 | InterPro:MIP | InterPro:MIP_CS | RefSeq:NP_192056.1 | UniProt:O82598 | PFAM:PF00230 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF151 |
| SUPFAM:SSF81338 | TMHMM:TMhelix | UniParc:UPI00000488D9 | SEG:seg | : | : |
Description
TIP1-3Aquaporin TIP1-3 [Source:UniProtKB/Swiss-Prot;Acc:O82598]
Coordinates
chr4:-:624786..625885
Molecular Weight (calculated)
25915.6 Da
IEP (calculated)
5.506
GRAVY (calculated)
0.831
Length
252 amino acids
Sequence
(BLAST)
(BLAST)
001: MPINRIAIGT PGEASRPDAI RAAFAEFFSM VIFVFAGQGS GMAYGKLTGD GPATPAGLVA ASLSHAFALF VAVSVGANVS GGHVNPAVTF GAFIGGNITL
101: LRAILYWIAQ LLGAVVACLL LKVSTGGMET AAFSLSYGVT PWNAVVFEIV MTFGLVYTVY ATAVDPKKGD IGIIAPLAIG LIVGANILVG GAFDGASMNP
201: AVSFGPAVVS WIWTNHWVYW VGPFIGAAIA AIVYDTIFIG SNGHEPLPSN DF
101: LRAILYWIAQ LLGAVVACLL LKVSTGGMET AAFSLSYGVT PWNAVVFEIV MTFGLVYTVY ATAVDPKKGD IGIIAPLAIG LIVGANILVG GAFDGASMNP
201: AVSFGPAVVS WIWTNHWVYW VGPFIGAAIA AIVYDTIFIG SNGHEPLPSN DF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.