Factsheet for VIT_13s0019g00330.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole, cytosol

Predictor Summary:

plastid 1
vacuole 4
cytosol 1
extracellular 1
endoplasmic reticulum 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, vacuole
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_08s0007g04780.t01	Wine grape	cytosol	84.46	84.46
AT4G01470.1	Thale cress	cytosol, golgi, plasma membrane	82.47	82.14
KRH70511	Soybean	cytosol	81.67	81.35
Bra037415.1-P	Field mustard	cytosol	81.27	80.95
CDY07142	Canola	cytosol	81.27	80.95
CDY69446	Canola	cytosol	81.27	80.95
KRH01591	Soybean	cytosol	81.27	80.95
VIT_06s0004g04120.t01	Wine grape	cytosol, plasma membrane, vacuole	85.26	79.85
KRH36204	Soybean	cytosol, extracellular, mitochondrion, plasma membrane	77.69	77.38
VIT_06s0061g00730.t01	Wine grape	cytosol, plasma membrane, vacuole	76.49	76.49
KRG90553	Soybean	extracellular	66.53	68.72
VIT_09s0002g04020.t01	Wine grape	plasma membrane, vacuole	61.75	62.25
VIT_00s0229g00130.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	58.96	59.2
VIT_16s0039g00220.t01	Wine grape	cytosol	60.56	58.69
VIT_00s2783g00010.t01	Wine grape	extracellular	28.29	57.26
VIT_16s0022g00330.t01	Wine grape	cytosol, extracellular, plasma membrane, plastid	45.82	46.18
VIT_15s0021g02420.t01	Wine grape	extracellular	41.04	41.04
VIT_04s0008g03550.t01	Wine grape	plasma membrane	47.81	39.87
VIT_13s0019g04280.t01	Wine grape	plasma membrane	36.26	32.04
VIT_06s0004g02850.t01	Wine grape	plasma membrane	35.46	31.79
VIT_08s0040g01890.t01	Wine grape	plasma membrane	36.26	31.71
VIT_18s0001g06480.t01	Wine grape	cytosol, extracellular, vacuole	16.73	29.79
VIT_03s0038g02520.t01	Wine grape	plasma membrane	33.07	29.75
VIT_15s0046g02420.t01	Wine grape	peroxisome	33.07	29.02
VIT_02s0025g03390.t01	Wine grape	peroxisome	33.07	28.92
VIT_13s0067g00220.t01	Wine grape	plasma membrane	32.67	28.67
VIT_15s0046g02410.t01	Wine grape	plasma membrane	32.67	28.67
VIT_12s0034g00250.t01	Wine grape	cytosol, extracellular, plastid	12.75	26.89

Protein Annotations

Gene3D:1.20.1080.10	EntrezGene:100233003	wikigene:100233003	MapMan:24.3.1.3	ProteinID:AAW02943	ProteinID:AAW02943.2
ProteinID:ABH09329	ProteinID:ABH09329.1	EMBL:AM443154	EMBL:AY839872	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr
ProteinID:CAN74049	ProteinID:CAN74049.1	ProteinID:CBI31728	ProteinID:CBI31728.3	UniProt:D7TLZ1	EMBL:DQ834701
EMBL:FN595998	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006833
GO:GO:0008150	GO:GO:0009705	GO:GO:0015250	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021
GO:GO:0034220	GO:GO:0042807	GO:GO:0055085	GO:GO:0071918	InterPro:IPR023271	InterPro:MIP
InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF265
SUPFAM:SSF81338	TIGR:TC53971	TIGR:TC61154	EntrezGene:TIP1;1	wikigene:TIP1;1	TMHMM:TMhelix
UniParc:UPI00015C9D59	ArrayExpress:VIT_13s0019g00330	EnsemblPlantsGene:VIT_13s0019g00330	EnsemblPlants:VIT_13s0019g00330.t01	unigene:Vvi.6693	unigene:Vvi.8431
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr13:+:2428952..2430676

Molecular Weight (calculated)

25840.4 Da

IEP (calculated)

5.435

GRAVY (calculated)

0.824

Length

251 amino acids

Sequence
(BLAST)

001: MPINRIAIGT PGEASHPDAL KAALAEFFSM LIFVFAGEGS GMAFNKLTDS GSSTPAGLVA AALAHGFALF VAVSVGANIS GGHVNPAVTF GAFIGGHITL
101: LRGILYWIAQ LLGSVVACLL LKFSTGGLET SAFSLSSGVS VWNALVFEIV MTFGLVYTVY ATAVDPKKGN LGIIAPIAIG FIVGANILAG GAFDGASMNP
201: AVSFGPAVVS WSWANHWVYW AGPLIGAAIA AIIYDLIFID STHEQLPTTD Y

Best Arabidopsis Sequence Match ( AT4G01470.1 )
(BLAST)

001: MPINRIAIGT PGEASRPDAI RAAFAEFFSM VIFVFAGQGS GMAYGKLTGD GPATPAGLVA ASLSHAFALF VAVSVGANVS GGHVNPAVTF GAFIGGNITL
101: LRAILYWIAQ LLGAVVACLL LKVSTGGMET AAFSLSYGVT PWNAVVFEIV MTFGLVYTVY ATAVDPKKGD IGIIAPLAIG LIVGANILVG GAFDGASMNP
201: AVSFGPAVVS WIWTNHWVYW VGPFIGAAIA AIVYDTIFIG SNGHEPLPSN DF

Arabidopsis Description

TIP1-3Aquaporin TIP1-3 [Source:UniProtKB/Swiss-Prot;Acc:O82598]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.