Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 4
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH23017 | Soybean | cytosol, plasma membrane, vacuole | 80.6 | 85.71 |
| VIT_13s0019g00330.t01 | Wine grape | cytosol, plasma membrane, vacuole | 79.85 | 85.26 |
| KRH29856 | Soybean | cytosol, plasma membrane, vacuole | 77.61 | 82.54 |
| VIT_08s0007g04780.t01 | Wine grape | cytosol | 76.87 | 82.07 |
| Solyc06g075650.2.1 | Tomato | endoplasmic reticulum | 77.24 | 81.82 |
| PGSC0003DMT400077927 | Potato | cytosol, plasma membrane, plastid, vacuole | 76.87 | 81.42 |
| KRH10300 | Soybean | endoplasmic reticulum, extracellular | 48.51 | 81.25 |
| KRH24847 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 74.25 | 81.22 |
| GSMUA_Achr10P... | Banana | plasma membrane | 75.37 | 80.16 |
| GSMUA_Achr6P15380_001 | Banana | cytosol, plasma membrane, vacuole | 75.0 | 79.76 |
| TraesCS3A01G535300.1 | Wheat | plasma membrane | 71.64 | 76.19 |
| TraesCS3D01G540900.1 | Wheat | plasma membrane | 71.64 | 76.19 |
| TraesCS3B01G608500.1 | Wheat | plasma membrane | 71.27 | 75.79 |
| HORVU3Hr1G116790.2 | Barley | vacuole | 70.9 | 75.4 |
| Zm00001d011778_P001 | Maize | plasma membrane | 70.52 | 74.41 |
| VIT_06s0061g00730.t01 | Wine grape | cytosol, plasma membrane, vacuole | 69.4 | 74.1 |
| EES04303 | Sorghum | cytosol | 70.15 | 72.87 |
| VIT_09s0002g04020.t01 | Wine grape | plasma membrane, vacuole | 57.84 | 62.25 |
| VIT_00s0229g00130.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 54.48 | 58.4 |
| VIT_16s0039g00220.t01 | Wine grape | cytosol | 55.22 | 57.14 |
| VIT_00s2783g00010.t01 | Wine grape | extracellular | 25.75 | 55.65 |
| VIT_16s0022g00330.t01 | Wine grape | cytosol, extracellular, plasma membrane, plastid | 44.78 | 48.19 |
| VIT_15s0021g02420.t01 | Wine grape | extracellular | 40.67 | 43.43 |
| VIT_04s0008g03550.t01 | Wine grape | plasma membrane | 47.39 | 42.19 |
| VIT_06s0004g02850.t01 | Wine grape | plasma membrane | 34.7 | 33.21 |
| VIT_08s0040g01890.t01 | Wine grape | plasma membrane | 33.96 | 31.71 |
| VIT_13s0019g04280.t01 | Wine grape | plasma membrane | 33.21 | 31.34 |
| VIT_18s0001g06480.t01 | Wine grape | cytosol, extracellular, vacuole | 16.42 | 31.21 |
| VIT_03s0038g02520.t01 | Wine grape | plasma membrane | 31.72 | 30.47 |
| VIT_15s0046g02420.t01 | Wine grape | peroxisome | 31.34 | 29.37 |
| VIT_15s0046g02410.t01 | Wine grape | plasma membrane | 30.97 | 29.02 |
| VIT_02s0025g03390.t01 | Wine grape | peroxisome | 30.97 | 28.92 |
| VIT_13s0067g00220.t01 | Wine grape | plasma membrane | 30.6 | 28.67 |
| VIT_12s0034g00250.t01 | Wine grape | cytosol, extracellular, plastid | 12.69 | 28.57 |
Protein Annotations
| Gene3D:1.20.1080.10 | EntrezGene:100250080 | wikigene:100250080 | MapMan:24.3.1.3 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr |
| ProteinID:CCB43605 | ProteinID:CCB43605.1 | UniProt:F6GV46 | EMBL:FN594951 | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005886 |
| GO:GO:0005887 | GO:GO:0006810 | GO:GO:0006833 | GO:GO:0008150 | GO:GO:0009705 | GO:GO:0015250 |
| GO:GO:0015267 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0034220 | GO:GO:0042807 | GO:GO:0055085 |
| InterPro:IPR023271 | EntrezGene:LOC100250080 | wikigene:LOC100250080 | InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 |
| PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF55 | SUPFAM:SSF81338 | TIGRFAMs:TIGR00861 |
| TMHMM:TMhelix | UniParc:UPI0002109CE1 | ArrayExpress:VIT_06s0004g04120 | EnsemblPlantsGene:VIT_06s0004g04120 | EnsemblPlants:VIT_06s0004g04120.t01 | RefSeq:XP_002284411 |
| RefSeq:XP_002284411.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr6:+:5090720..5091916
Molecular Weight (calculated)
28034.0 Da
IEP (calculated)
7.823
GRAVY (calculated)
0.694
Length
268 amino acids
Sequence
(BLAST)
(BLAST)
001: MPIPRIALGS PAEAGQADAL KAALAEFISV LIFVFAGEGS GMAFNKLTDD GSSTPAGLVA AAVAHAFALF VAVSIAANIS GGHVNPAVTF GALVGGHITL
101: FRSLLYWIAQ LLGSVVACLL LKFATGGLVR NHYNHSHRQQ LRIRTTSAFS LSSGVSAWNA LVFEIVMTFG LVYTVYATAI DPKKGNIGII APIAIGFIVG
201: ANILAGGAFD GASMNPAVSF GPAVVSWTWS NHWVYWLGPF IGAAIAAFVY SIFYLSPTTH EQLPTTDY
101: FRSLLYWIAQ LLGSVVACLL LKFATGGLVR NHYNHSHRQQ LRIRTTSAFS LSSGVSAWNA LVFEIVMTFG LVYTVYATAI DPKKGNIGII APIAIGFIVG
201: ANILAGGAFD GASMNPAVSF GPAVVSWTWS NHWVYWLGPF IGAAIAAFVY SIFYLSPTTH EQLPTTDY
001: MPIRNIAIGR PDEATRPDAL KAALAEFIST LIFVVAGSGS GMAFNKLTEN GATTPSGLVA AAVAHAFGLF VAVSVGANIS GGHVNPAVTF GAFIGGNITL
101: LRGILYWIAQ LLGSVVACLI LKFATGGLAV PAFGLSAGVG VLNAFVFEIV MTFGLVYTVY ATAIDPKNGS LGTIAPIAIG FIVGANILAG GAFSGASMNP
201: AVAFGPAVVS WTWTNHWVYW AGPLVGGGIA GLIYEVFFIN TTHEQLPTTD Y
101: LRGILYWIAQ LLGSVVACLI LKFATGGLAV PAFGLSAGVG VLNAFVFEIV MTFGLVYTVY ATAIDPKNGS LGTIAPIAIG FIVGANILAG GAFSGASMNP
201: AVAFGPAVVS WTWTNHWVYW AGPLVGGGIA GLIYEVFFIN TTHEQLPTTD Y
Arabidopsis Description
TIP1-1Aquaporin TIP1-1 [Source:UniProtKB/Swiss-Prot;Acc:P25818]
SUBAcon: [plasma membrane,golgi,vacuole]
SUBAcon: [plasma membrane,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.