Factsheet for VIT_16s0022g00330.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, extracellular, cytosol

Predictor Summary:

plastid 2
vacuole 3
extracellular 2
plasma membrane 3
endoplasmic reticulum 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, plasma membrane, plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
EpiLoc:	vacuole
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane, vacuole
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400038394	Potato	plastid	69.48	68.92
Solyc03g093230.2.1	Tomato	plastid	69.08	68.53
KRH39857	Soybean	plastid	67.47	66.67
KRH23943	Soybean	plasma membrane	45.78	62.3
AT3G47440.1	Thale cress	mitochondrion, plastid	63.45	61.72
Bra018148.1-P	Field mustard	extracellular, plasma membrane, plastid	61.45	60.0
CDX99048	Canola	mitochondrion, plastid	61.45	59.3
CDY47413	Canola	mitochondrion, plastid	61.04	58.91
GSMUA_Achr4P24600_001	Banana	golgi, plasma membrane, plastid	60.64	57.41
TraesCS2D01G411500.1	Wheat	endoplasmic reticulum	59.04	56.11
TraesCS2B01G433300.1	Wheat	endoplasmic reticulum	55.42	55.65
TraesCS2A01G414200.1	Wheat	plastid	57.43	54.58
OQU82093	Sorghum	plasma membrane	58.23	54.31
VIT_00s2783g00010.t01	Wine grape	extracellular	26.91	54.03
VIT_00s0229g00130.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	53.01	52.8
VIT_09s0002g04020.t01	Wine grape	plasma membrane, vacuole	51.41	51.41
Os04t0550800-01	Rice	endoplasmic reticulum, plasma membrane	55.42	51.3
VIT_08s0007g04780.t01	Wine grape	cytosol	49.8	49.4
VIT_15s0021g02420.t01	Wine grape	extracellular	49.4	49.0
Zm00001d026178_P002	Maize	plastid	52.21	48.69
VIT_06s0061g00730.t01	Wine grape	cytosol, plasma membrane, vacuole	48.59	48.21
VIT_16s0039g00220.t01	Wine grape	cytosol	48.19	46.33
VIT_13s0019g00330.t01	Wine grape	cytosol, plasma membrane, vacuole	46.18	45.82
VIT_06s0004g04120.t01	Wine grape	cytosol, plasma membrane, vacuole	48.19	44.78
HORVU2Hr1G097780.15	Barley	golgi, mitochondrion, plastid	44.58	41.26
VIT_04s0008g03550.t01	Wine grape	plasma membrane	43.78	36.21
VIT_06s0004g02850.t01	Wine grape	plasma membrane	32.53	28.93
VIT_13s0067g00220.t01	Wine grape	plasma membrane	32.53	28.32
VIT_15s0046g02420.t01	Wine grape	peroxisome	32.13	27.97
VIT_03s0038g02520.t01	Wine grape	plasma membrane	31.33	27.96
VIT_12s0034g00250.t01	Wine grape	cytosol, extracellular, plastid	13.25	27.73
VIT_02s0025g03390.t01	Wine grape	peroxisome	31.33	27.18
VIT_18s0001g06480.t01	Wine grape	cytosol, extracellular, vacuole	15.26	26.95
VIT_08s0040g01890.t01	Wine grape	plasma membrane	30.92	26.83
VIT_13s0019g04280.t01	Wine grape	plasma membrane	30.52	26.76
VIT_15s0046g02410.t01	Wine grape	plasma membrane	30.12	26.22

Protein Annotations

Gene3D:1.20.1080.10	EntrezGene:100246683	wikigene:100246683	MapMan:24.3.1.3	EMBL:AM481595	InterPro:Aquaporin-like
InterPro:Aquaporin_transptr	ProteinID:CAN73028	ProteinID:CAN73028.1	ProteinID:CCB49343	ProteinID:CCB49343.1	UniProt:F6HAV8
EMBL:FN595506	GO:GO:0000003	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005773	GO:GO:0005886	GO:GO:0005887
GO:GO:0006810	GO:GO:0006833	GO:GO:0007275	GO:GO:0008150	GO:GO:0009705	GO:GO:0009987
GO:GO:0015204	GO:GO:0015250	GO:GO:0015267	GO:GO:0015840	GO:GO:0016020	GO:GO:0016021
GO:GO:0030154	GO:GO:0034220	GO:GO:0042807	GO:GO:0048235	GO:GO:0055085	GO:GO:0071918
GO:GO:0090406	InterPro:IPR023271	EntrezGene:LOC100246683	wikigene:LOC100246683	InterPro:MIP	InterPro:MIP_CS
PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF54	SUPFAM:SSF81338
TMHMM:TMhelix	UniParc:UPI00015CA31F	ArrayExpress:VIT_16s0022g00330	EnsemblPlantsGene:VIT_16s0022g00330	EnsemblPlants:VIT_16s0022g00330.t01	RefSeq:XP_002268114
RefSeq:XP_002268114.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr16:-:11247876..11248951

Molecular Weight (calculated)

25492.0 Da

IEP (calculated)

6.081

GRAVY (calculated)

0.660

Length

249 amino acids

Sequence
(BLAST)

001: MAPNSLSVRL EESFTRNALR SYLAEFISTF IFVFAAVGSA MSSRKLMPDA TSDPSSLLVV ALANAFALSS AVYIAAGISG GHVNPAVTFG LAVGGHVSIP
101: TAMLYWISQM LGATMACLFL RVTTVGQHVP THAIAEEMTG FGASVLEGVL TFALVYTVYA AGDPRRGPLG SIGPLAIGLI EGANVLAAGP FTGGSMNPAS
201: SFGSALVGGT FKNQAVYWVG PLIGGALAGL LYENVVFPPQ DTAISQVGV

Best Arabidopsis Sequence Match ( AT3G47440.1 )
(BLAST)

001: MRRMIPTSFS SKFQGVLSMN ALRCYVSEFI STFFFVLAAV GSVMSSRKLM AGDVSGPFGV LIPAIANALA LSSSVYISWN VSGGHVNPAV TFAMAVAGRI
101: SVPTAMFYWT SQMIASVMAC LVLKVTVMEQ HVPIYKIAGE MTGFGASVLE GVLAFVLVYT VFTASDPRRG LPLAVGPIFI GFVAGANVLA AGPFSGGSMN
201: PACAFGSAMV YGSFKNQAVY WVGPLLGGAT AALVYDNVVV PVEDDRGSST GDAIGV

Arabidopsis Description

TIP5-1Probable aquaporin TIP5-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9STX9]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.