Factsheet for Solyc03g093230.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 3
plasma membrane 3
vacuole 2
extracellular 1
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Plant-mPloc:	plasma membrane, vacuole
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400038394	Potato	plastid	99.2	99.2
VIT_16s0022g00330.t01	Wine grape	cytosol, extracellular, plasma membrane, plastid	68.53	69.08
KRH39857	Soybean	plastid	60.96	60.71
AT3G47440.1	Thale cress	mitochondrion, plastid	58.96	57.81
KRH23943	Soybean	plasma membrane	41.83	57.38
Bra018148.1-P	Field mustard	extracellular, plasma membrane, plastid	57.37	56.47
CDY47413	Canola	mitochondrion, plastid	57.77	56.2
CDX99048	Canola	mitochondrion, plastid	57.37	55.81
GSMUA_Achr4P24600_001	Banana	golgi, plasma membrane, plastid	58.17	55.51
TraesCS2D01G411500.1	Wheat	endoplasmic reticulum	57.37	54.96
TraesCS2B01G433300.1	Wheat	endoplasmic reticulum	54.18	54.84
TraesCS2A01G414200.1	Wheat	plastid	56.57	54.2
OQU82093	Sorghum	plasma membrane	54.18	50.94
Os04t0550800-01	Rice	endoplasmic reticulum, plasma membrane	54.18	50.56
Solyc06g060760.2.1	Tomato	endoplasmic reticulum	48.61	48.8
Solyc12g044330.1.1	Tomato	plastid	46.61	47.18
Solyc10g083880.1.1	Tomato	plastid	45.82	46.37
Solyc06g075650.2.1	Tomato	endoplasmic reticulum	46.61	46.25
Zm00001d026178_P002	Maize	plastid	49.0	46.07
Solyc06g066560.1.1	Tomato	mitochondrion	47.81	43.96
Solyc06g074820.2.1	Tomato	plastid	43.03	43.2
Solyc03g019820.2.1	Tomato	cytosol, golgi, plasma membrane	44.22	42.69
Solyc06g072130.2.1	Tomato	extracellular	43.82	42.47
HORVU2Hr1G097780.15	Barley	golgi, mitochondrion, plastid	43.03	40.15
Solyc08g066840.2.1	Tomato	endoplasmic reticulum, plasma membrane	39.04	39.68
Solyc09g007770.2.1	Tomato	nucleus	30.28	29.34
Solyc10g084120.1.1	Tomato	nucleus	31.47	28.11
Solyc01g094690.2.1	Tomato	nucleus	30.28	26.67
Solyc02g083510.2.1	Tomato	nucleus	27.49	26.64
Solyc03g096290.2.1	Tomato	nucleus	30.28	26.57
Solyc11g069430.1.1	Tomato	plastid	29.48	25.78
Solyc01g111660.2.1	Tomato	nucleus	28.69	25.44
Solyc08g008050.2.1	Tomato	peroxisome	29.08	25.44
Solyc06g011350.2.1	Tomato	nucleus	28.29	25.36
Solyc12g056220.1.1	Tomato	plastid	29.08	25.35
Solyc08g081190.2.1	Tomato	plastid	28.69	25.17
Solyc10g055630.1.1	Tomato	nucleus, plastid	28.29	25.09
Solyc09g007760.2.1	Tomato	extracellular	30.28	24.84
Solyc05g055990.2.1	Tomato	nucleus, plasma membrane	27.49	23.88

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.3	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	GO:GO:0000003	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005773	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006833	GO:GO:0007275
GO:GO:0008150	GO:GO:0009705	GO:GO:0009987	GO:GO:0015204	GO:GO:0015250	GO:GO:0015267
GO:GO:0015840	GO:GO:0016020	GO:GO:0016021	GO:GO:0030154	GO:GO:0034220	GO:GO:0042807
GO:GO:0048235	GO:GO:0055085	GO:GO:0071918	GO:GO:0090406	InterPro:IPR023271	UniProt:K4BIK0
InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139
PANTHER:PTHR19139:SF54	SUPFAM:SSF81338	EnsemblPlantsGene:Solyc03g093230.2	EnsemblPlants:Solyc03g093230.2.1	TMHMM:TMhelix	UniParc:UPI0002768EF2

Description

Probable aquaporin TIP5-1 [Source:Projected from Arabidopsis thaliana (AT3G47440) UniProtKB/Swiss-Prot;Acc:Q9STX9]

Coordinates

chr3:+:54425062..54426376

Molecular Weight (calculated)

25869.6 Da

IEP (calculated)

8.220

GRAVY (calculated)

0.713

Length

251 amino acids

Sequence
(BLAST)

001: MASLASRLQH SVTPNALRSY LAEFLSTFFF VFAAAGASMS TRKMVPDATS DPSSLVAIAV ANAFALSVAV YISANISGGH VNPAVTFGMA VGGHISIPMS
101: IFYWISQMIG SVTACLLLKF TNQQVPTHGI PQEMTGFGAA VLEGVMTFGL VYTVYAAADP RRCVHAAIGP LAIGLMLGAN VMASGPFTGG SMNPAYSFGS
201: AVVKGSFGNQ AVYWIGPFIG AAIAGLVYDN VVFPLQVTES LRGIGGGIVA V

Best Arabidopsis Sequence Match ( AT3G47440.1 )
(BLAST)

001: MRRMIPTSFS SKFQGVLSMN ALRCYVSEFI STFFFVLAAV GSVMSSRKLM AGDVSGPFGV LIPAIANALA LSSSVYISWN VSGGHVNPAV TFAMAVAGRI
101: SVPTAMFYWT SQMIASVMAC LVLKVTVMEQ HVPIYKIAGE MTGFGASVLE GVLAFVLVYT VFTASDPRRG LPLAVGPIFI GFVAGANVLA AGPFSGGSMN
201: PACAFGSAMV YGSFKNQAVY WVGPLLGGAT AALVYDNVVV PVEDDRGSST GDAIGV

Arabidopsis Description

TIP5-1Probable aquaporin TIP5-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9STX9]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.