Factsheet for Solyc09g007760.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 2
golgi 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

extracellular: 29876421

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g007770.2.1	Tomato	nucleus	83.01	98.07
PGSC0003DMT400053882	Potato	extracellular	61.11	95.41
PGSC0003DMT400053877	Potato	plasma membrane	84.97	93.19
Solyc10g084120.1.1	Tomato	nucleus	79.74	86.83
PGSC0003DMT400053881	Potato	plasma membrane	83.99	83.71
KRG91899	Soybean	plasma membrane	77.45	83.45
KRH70183	Soybean	mitochondrion	77.45	83.16
KRH08522	Soybean	plasma membrane	77.12	82.81
KRH70184	Soybean	plasma membrane	77.12	82.81
KRH08523	Soybean	plasma membrane	76.8	82.46
Solyc06g011350.2.1	Tomato	nucleus	72.88	79.64
KRH34875	Soybean	plasma membrane	76.8	79.39
EER98451	Sorghum	plasma membrane	74.84	78.97
Zm00001d019563_P006	Maize	plasma membrane	74.51	78.62
TraesCS2A01G198500.1	Wheat	plasma membrane	74.18	78.28
TraesCS2D01G206300.1	Wheat	golgi	73.86	77.93
TraesCS2B01G225900.1	Wheat	golgi	73.86	77.93
Os07t0448800-01	Rice	plasma membrane	73.86	77.93
Solyc10g055630.1.1	Tomato	nucleus, plastid	71.24	77.03
Zm00001d005421_P001	Maize	plasma membrane	72.88	76.37
Solyc11g069430.1.1	Tomato	plastid	71.57	76.31
Solyc01g111660.2.1	Tomato	nucleus	68.95	74.56
Solyc02g083510.2.1	Tomato	nucleus	62.42	73.75
Solyc03g096290.2.1	Tomato	nucleus	63.4	67.83
Solyc01g094690.2.1	Tomato	nucleus	62.09	66.67
HORVU2Hr1G038740.1	Barley	golgi, mitochondrion, plasma membrane	73.86	66.28
Solyc08g008050.2.1	Tomato	peroxisome	62.09	66.2
Solyc08g081190.2.1	Tomato	plastid	61.76	66.08
Solyc12g056220.1.1	Tomato	plastid	62.09	65.97
Solyc05g055990.2.1	Tomato	nucleus, plasma membrane	53.59	56.75
Solyc12g044330.1.1	Tomato	plastid	31.7	39.11
Solyc06g074820.2.1	Tomato	plastid	30.72	37.6
Solyc06g060760.2.1	Tomato	endoplasmic reticulum	30.72	37.6
Solyc10g083880.1.1	Tomato	plastid	30.39	37.5
Solyc06g075650.2.1	Tomato	endoplasmic reticulum	30.07	36.36
Solyc06g066560.1.1	Tomato	mitochondrion	32.03	35.9
Solyc08g066840.2.1	Tomato	endoplasmic reticulum, plasma membrane	27.78	34.41
Solyc06g072130.2.1	Tomato	extracellular	28.43	33.59
Solyc03g019820.2.1	Tomato	cytosol, golgi, plasma membrane	26.47	31.15
Solyc03g093230.2.1	Tomato	plastid	24.84	30.28

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.2	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006833
GO:GO:0008150	GO:GO:0015250	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0034220
GO:GO:0055085	InterPro:IPR023271	UniProt:K4CQG5	InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230
PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF158	SUPFAM:SSF81338	EnsemblPlantsGene:Solyc09g007760.2
EnsemblPlants:Solyc09g007760.2.1	TIGRFAMs:TIGR00861	TMHMM:TMhelix	UniParc:UPI000276B905	:	:

Description

No Description!

Coordinates

chr9:-:1295368..1298246

Molecular Weight (calculated)

33359.9 Da

IEP (calculated)

10.072

GRAVY (calculated)

0.306

Length

306 amino acids

Sequence
(BLAST)

001: MVRHEWLKES TRAKKQRQPK KKTETQKWAK IWRLVLNMHQ KTYQDPPPAP LIDPEELGKW SFYRAIIAEF IATLLFLYIT VLTVIGYKSQ SSTDQCGGVG
101: ILGIAWAFGG MIFVLVYCTA GISGGHINPA VTFGLFLARK VSLVRAIMYI VAQCLGAICG CGLVKAFQKA YYVKYGGGAN TLNDGYSTGT GLGAEIIGTF
201: VLVYTVFAAT DPKRNARDSH VPVLAPLPIG FAVFMVHLAT IPVTGTGINP ARSFGAAVVY GHNKAWDDQW IFWVGPFIGA AIAAFYHQFI LRAGAVKALG
301: SFRSNA

Best Arabidopsis Sequence Match ( AT3G53420.2 )
(BLAST)

001: MAKDVEAVPG EGFQTRDYQD PPPAPFIDGA ELKKWSFYRA VIAEFVATLL FLYITVLTVI GYKIQSDTDA GGVDCGGVGI LGIAWAFGGM IFILVYCTAG
101: ISGGHINPAV TFGLFLARKV SLPRALLYII AQCLGAICGV GFVKAFQSSY YTRYGGGANS LADGYSTGTG LAAEIIGTFV LVYTVFSATD PKRSARDSHV
201: PVLAPLPIGF AVFMVHLATI PITGTGINPA RSFGAAVIYN KSKPWDDHWI FWVGPFIGAA IAAFYHQFVL RASGSKSLGS FRSAANV

Arabidopsis Description

PIP2-1PIP2A [Source:UniProtKB/TrEMBL;Acc:A0A178V8P4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.