Factsheet for HORVU4Hr1G085250.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, vacuole
ChloroP:	plastid
MultiLoc:	vacuole
TargetP:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G084420.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G25810.1	HORVU2Hr1G084420.1	AT1G27300.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G349500.1	Wheat	plasma membrane	79.73	94.12
TraesCS5A01G518300.1	Wheat	golgi, plasma membrane, vacuole	79.73	93.75
TraesCS4D01G344300.1	Wheat	plasma membrane	79.4	93.73
Zm00001d037779_P001	Maize	cytosol, plasma membrane, vacuole	63.12	74.51
Zm00001d015518_P001	Maize	endoplasmic reticulum, extracellular	25.58	72.64
Zm00001d019676_P001	Maize	endoplasmic reticulum, extracellular, plastid	25.25	71.7
Zm00001d020747_P001	Maize	extracellular	25.25	71.03
Os05t0231700-01	Rice	golgi, mitochondrion, plasma membrane	72.76	69.75
Zm00001d010410_P001	Maize	plasma membrane, plastid	66.11	63.99
EES17913	Sorghum	cytosol, plastid	66.45	63.69
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, vacuole	50.17	60.64
CDY35336	Canola	extracellular	26.58	55.94
PGSC0003DMT400024847	Potato	extracellular, plasma membrane, vacuole	45.51	55.47
CDX77009	Canola	cytosol, plasma membrane, vacuole	45.51	55.02
Solyc08g066840.2.1	Tomato	endoplasmic reticulum, plasma membrane	44.85	54.66
Bra034271.1-P	Field mustard	cytosol, plasma membrane, vacuole	45.18	54.62
AT2G25810.1	Thale cress	cytosol, golgi, plasma membrane	44.85	54.22
KRH52727	Soybean	cytosol	43.52	53.25
GSMUA_Achr9P06260_001	Banana	cytosol, golgi, plasma membrane	44.52	52.55
KRH62059	Soybean	cytosol, plasma membrane, vacuole	42.86	52.44
GSMUA_Achr1P13800_001	Banana	cytosol	41.2	48.82
HORVU4Hr1G079230.1	Barley	vacuole	38.54	46.4
VIT_04s0008g03550.t01	Wine grape	plasma membrane	45.85	45.85
HORVU0Hr1G032130.2	Barley	endoplasmic reticulum, plasma membrane, vacuole	37.54	45.38
HORVU6Hr1G062980.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	37.54	45.38
HORVU7Hr1G081770.8	Barley	plasma membrane	35.22	42.57
HORVU3Hr1G116790.2	Barley	vacuole	35.55	42.46
HORVU3Hr1G031620.5	Barley	nucleus, peroxisome, plastid	42.52	40.25
HORVU3Hr1G031680.1	Barley	vacuole	32.56	36.57
HORVU1Hr1G043890.2	Barley	mitochondrion	31.56	36.12
HORVU2Hr1G089940.3	Barley	plasma membrane	25.58	26.55
HORVU5Hr1G125600.1	Barley	golgi, peroxisome, plasma membrane	25.58	26.46
HORVU0Hr1G014490.7	Barley	plastid	25.91	26.26
HORVU5Hr1G084230.1	Barley	extracellular, golgi, mitochondrion	25.58	24.76
HORVU2Hr1G089970.3	Barley	endoplasmic reticulum, extracellular	6.98	24.71
HORVU6Hr1G014300.1	Barley	cytosol, golgi, peroxisome	23.92	24.66
HORVU6Hr1G058930.20	Barley	golgi, plasma membrane	22.59	23.53
HORVU2Hr1G097780.15	Barley	golgi, mitochondrion, plastid	20.27	22.68
HORVU2Hr1G038740.1	Barley	golgi, mitochondrion, plasma membrane	25.25	22.29
HORVU0Hr1G011280.5	Barley	cytosol	19.27	22.14
HORVU6Hr1G064140.1	Barley	golgi, peroxisome, plasma membrane	21.26	22.07
HORVU7Hr1G038940.1	Barley	golgi	14.95	22.06
HORVU5Hr1G055200.4	Barley	golgi, plastid	22.26	21.54
HORVU5Hr1G029550.2	Barley	plasma membrane	22.59	21.38
HORVU2Hr1G010990.2	Barley	plasma membrane	22.26	21.07
HORVU5Hr1G027240.4	Barley	plasma membrane	22.26	21.07
HORVU2Hr1G089820.6	Barley	golgi	17.28	18.18

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.3	UniProt:A0A287PY55	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015267	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	EnsemblPlantsGene:HORVU4Hr1G085250	EnsemblPlants:HORVU4Hr1G085250.2	InterPro:IPR023271	InterPro:MIP
InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF143
SUPFAM:SSF81338	TMHMM:TMhelix	UniParc:UPI000B46B5C7	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr4H:-:631305836..631307807

Molecular Weight (calculated)

31354.6 Da

IEP (calculated)

6.712

GRAVY (calculated)

0.722

Length

301 amino acids

Sequence
(BLAST)

001: EISTDSSEPN FSVRFCIVLS FHPSSFLPSI PRTRATSVVE FSPAMAATKH ADSFDEREVA VVDTGCVRTV LGELVLTFLF VFTGVAAAMA AGVPELPGAA
101: MPMATLAGVA LAQALAAGVL VTAGFHVSGG HLNPAVTVAL LARGHITAFR AVLYVVAQLL ASSLACILLR CLTGGQPTPV PVHTLGAGIG PMQGLVMEII
201: LTFSLLFVVY ATILDPRTTV PGYGPMLTGL IVGANTIAGG NFSGASMNPA RSFGPALATG VWTNHWIYWV GPLVGGPLAG FVYEMVFMVK KTHEPLLGWD
301: F

Best Arabidopsis Sequence Match ( AT2G25810.1 )
(BLAST)

001: MKKIELGHHS EAAKPDCIKA LIVEFITTFL FVFAGVGSAM ATDSLVGNTL VGLFAVAVAH AFVVAVMISA GHISGGHLNP AVTLGLLLGG HISVFRAFLY
101: WIDQLLASSA ACFLLSYLTG GMGTPVHTLA SGVSYTQGII WEIILTFSLL FTVYATIVDP KKGSLDGFGP LLTGFVVGAN ILAGGAFSGA SMNPARSFGP
201: ALVSGNWTDH WVYWVGPLIG GGLAGFIYEN VLIDRPHVPV ADDEQPLLN

Arabidopsis Description

TIP4-1Aquaporin TIP4-1 [Source:UniProtKB/Swiss-Prot;Acc:O82316]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.