Factsheet for Zm00001d019565_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

extracellular: 20408568
plasma membrane: 23353019
plasma membrane: 23508561
plasma membrane: 27341663

msms PMID: 23353019 doi

D Hopff, S Wienkoop, S Lüthje

University of Hamburg, Biocenter Klein Flottbek and Botanical Garden, Plant Physiology, Ohnhorststraße 18, D-22609 Hamburg, Germany.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 23508561 doi

Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck

Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d005410_P001	Maize	plasma membrane	96.88	97.55
Os07t0448100-01	Rice	plasma membrane	90.97	91.61
TraesCS5A01G100000.1	Wheat	plasma membrane	90.97	91.61
TraesCS5D01G112500.1	Wheat	plasma membrane	90.62	91.26
Zm00001d003006_P001	Maize	plasma membrane	84.38	85.26
Zm00001d051174_P002	Maize	plasma membrane	85.07	84.78
Zm00001d017288_P001	Maize	plasma membrane	84.72	84.72
Zm00001d019563_P006	Maize	plasma membrane	80.9	80.34
Zm00001d005421_P001	Maize	plasma membrane	79.51	78.42
Os07t0448200-00	Rice	mitochondrion, nucleus, plastid	72.57	75.45
HORVU5Hr1G027240.4	Barley	plasma membrane	81.25	73.58
HORVU5Hr1G029550.2	Barley	plasma membrane	80.9	73.27
HORVU0Hr1G011280.5	Barley	cytosol	65.62	72.14
OQU88961	Sorghum	plastid	92.01	70.86
Zm00001d014285_P001	Maize	plasma membrane	69.1	70.32
Zm00001d022608_P001	Maize	plasma membrane	68.75	68.75
Zm00001d051872_P001	Maize	plasma membrane	67.01	67.01
Zm00001d017526_P001	Maize	plasma membrane	66.67	66.44
Zm00001d002690_P001	Maize	plasma membrane	66.32	66.32
Zm00001d051403_P001	Maize	plasma membrane	67.01	66.1
Zm00001d026177_P001	Maize	extracellular	32.99	38.31
Zm00001d002738_P001	Maize	plasma membrane	32.29	37.5
Zm00001d011778_P001	Maize	plasma membrane	31.6	35.83
Zm00001d051362_P001	Maize	plasma membrane	30.56	35.34
Zm00001d017485_P002	Maize	endoplasmic reticulum, extracellular, plasma membrane	30.56	35.2
Zm00001d027652_P001	Maize	plasma membrane	30.56	35.2
Zm00001d032610_P003	Maize	mitochondrion, plastid	30.9	33.46
Zm00001d013956_P003	Maize	plasma membrane	29.86	32.82
Zm00001d019676_P001	Maize	endoplasmic reticulum, extracellular, plastid	11.81	32.08
Zm00001d015518_P001	Maize	endoplasmic reticulum, extracellular	11.81	32.08
Zm00001d002952_P001	Maize	plasma membrane	28.12	30.57
Zm00001d039713_P001	Maize	plasma membrane	25.69	29.72
Zm00001d037779_P001	Maize	cytosol, plasma membrane, vacuole	26.04	29.41
Zm00001d039293_P001	Maize	plastid	28.47	28.57
Zm00001d020747_P001	Maize	extracellular	10.42	28.04
Zm00001d026178_P002	Maize	plastid	25.35	27.34
Zm00001d010410_P001	Maize	plasma membrane, plastid	26.39	24.44
Zm00001d048520_P014	Maize	mitochondrion	22.57	24.25

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.2	EntrezGene:541891	EMBL:AF326495	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr
UniProt:B4FS42	EMBL:BT039930	EMBL:EU964089	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0006833	GO:GO:0008150	GO:GO:0015250
GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR023271	InterPro:MIP
InterPro:MIP_CS	ProteinID:ONM53265.1	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139
PANTHER:PTHR19139:SF133	UniProt:Q9ATM5	SUPFAM:SSF81338	TIGRFAMs:TIGR00861	TMHMM:TMhelix	UniParc:UPI00000A2601
EnsemblPlantsGene:Zm00001d019565	EnsemblPlants:Zm00001d019565_P001	EnsemblPlants:Zm00001d019565_T001	SEG:seg	:	:

Description

plasma membrane intrinsic protein2Aquaporin PIP2-6

Coordinates

chr7:-:43071903..43073370

Molecular Weight (calculated)

30192.5 Da

IEP (calculated)

8.421

GRAVY (calculated)

0.527

Length

288 amino acids

Sequence
(BLAST)

001: MGKEVDVSTL EAGGVRDRDY ADPPPAPLID IDELGKWSLY RAVIAEFVAT LLFLYITVAT VIGYKHQTDA SASGPDAACS GVGILGIAWA FGGMIFILVY
101: CTAGISGGHI NPAVTFGLFL ARKVSLVRAL LYMAAQSLGA ICGVALVKGF QSGFYARYGG GANEVSAGYS TGTGLAAEII GTFVLVYTVF SATDPKRNAR
201: DSHVPVLAPL PIGFAVFMVH LATIPITGTG INPARSLGAA VVYNNSKAWS DQWIFWVGPF IGAAIAALYH QIVLRASARG YGSFRSNA

Best Arabidopsis Sequence Match ( AT2G37170.1 )
(BLAST)

001: MAKDVEGPEG FQTRDYEDPP PTPFFDADEL TKWSLYRAVI AEFVATLLFL YITVLTVIGY KIQSDTKAGG VDCGGVGILG IAWAFGGMIF ILVYCTAGIS
101: GGHINPAVTF GLFLARKVSL IRAVLYMVAQ CLGAICGVGF VKAFQSSYYD RYGGGANSLA DGYNTGTGLA AEIIGTFVLV YTVFSATDPK RNARDSHVPV
201: LAPLPIGFAV FMVHLATIPI TGTGINPARS FGAAVIYNKS KPWDDHWIFW VGPFIGAAIA AFYHQFVLRA SGSKSLGSFR SAANV

Arabidopsis Description

PIP2Bplasma membrane intrinsic protein 2 [Source:TAIR;Acc:AT2G37170]
SUBAcon: [peroxisome,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.