CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001502.1-P	Field mustard	nucleus, plastid	95.03	95.25
CDX75706	Canola	cytosol, golgi, nucleus	80.59	85.0
CDY24192	Canola	plastid	39.05	57.1
CDY43354	Canola	cytosol, golgi, nucleus	50.56	56.14
AT3G13360.2	Thale cress	extracellular, plasma membrane, vacuole	53.27	45.56
VIT_19s0015g01790.t01	Wine grape	nucleus	33.63	24.27
CDX89333	Canola	nucleus	25.73	23.03
PGSC0003DMT400022426	Potato	nucleus	30.02	22.7
CDX94330	Canola	nucleus	24.61	22.2
CDY17403	Canola	nucleus	13.77	22.1
KRH62532	Soybean	endoplasmic reticulum	28.67	21.71
PGSC0003DMT400056956	Potato	nucleus	29.12	21.57
CDY32806	Canola	cytosol, golgi, nucleus	13.32	21.15
KRH56393	Soybean	cytosol	27.77	20.95
Os04t0471300-01	Rice	cytosol, golgi, nucleus	14.22	20.86
Solyc07g066170.2.1	Tomato	nucleus	15.58	20.6
TraesCS2B01G351300.1	Wheat	cytosol, golgi, nucleus	13.54	20.13
TraesCS7B01G135800.1	Wheat	cytosol, golgi, nucleus	23.93	19.7
GSMUA_Achr10P...	Banana	cytosol	21.9	19.25
TraesCS7A01G240200.1	Wheat	cytosol	23.48	19.12
GSMUA_Achr4P01630_001	Banana	cytosol, golgi, nucleus	25.51	18.99
GSMUA_Achr3P04120_001	Banana	nucleus	25.28	18.86
TraesCS7D01G238200.1	Wheat	cytosol	22.8	18.81
HORVU7Hr1G048940.3	Barley	cytosol	23.48	18.21
TraesCS5B01G256500.1	Wheat	cytosol, golgi, nucleus, plastid	22.35	18.13
EES14314	Sorghum	nucleus	20.54	17.98
Os08t0497900-01	Rice	nucleus	18.51	17.75
Zm00001d020879_P001	Maize	cytosol, golgi, nucleus, plastid	16.03	17.71
TraesCS5A01G257000.1	Wheat	cytosol, golgi, nucleus, plastid	21.67	17.61
Zm00001d003334_P001	Maize	cytosol, nucleus, plastid	12.19	17.53
HORVU5Hr1G071910.1	Barley	nucleus	21.67	17.52
OQU81760	Sorghum	nucleus	16.7	17.37
Zm00001d005997_P002	Maize	plastid	20.77	17.1
TraesCS5D01G265600.1	Wheat	nucleus	21.22	17.03
EER96942	Sorghum	cytosol, golgi, nucleus, plastid	20.32	16.61
HORVU2Hr1G081800.3	Barley	cytosol, nucleus	17.16	16.45
TraesCS2A01G331000.1	Wheat	cytosol	18.51	16.08
Zm00001d025667_P001	Maize	cytosol	17.38	15.78
TraesCS2D01G332000.1	Wheat	cytosol	18.06	15.69
Os09t0481300-01	Rice	nucleus	18.51	15.56

Protein Annotations

EnsemblPlants:CDX82542	EnsemblPlantsGene:GSBRNA2T00137701001	GO:A0A078D0A6	ncoils:Coil	PANTHER:PTHR34562	PANTHER:PTHR34562:SF1
ProteinID:CDX82542	ProteinID:CDX82542.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EE5536	MapMan:20.4.2.1.2

Description

BnaA03g32790D

Coordinates

chrLK031828:+:1837093..1838727

Molecular Weight (calculated)

48781.2 Da

IEP (calculated)

6.256

GRAVY (calculated)

-0.642

Length

443 amino acids

Sequence
(BLAST)

001: MTIDAPNSLA SSVNSQREAF FVQSGMNHSV PESVEGVGSP QRSNSVDSLK AETPTRKGFG LKKWRRIKRD GPVKDEATTT PADDEGSKLL KRGLTGLVNP
101: PLKHVDLSSV EARQSSEGSV GSVNMAVHHH HLVQGVANGF STDPGVMFSV GFEKSEEGSD NSVAAKNVVG GKVVSGSQGK IWRDTIKNAS QKPCSSVESD
201: LRSSDFVFSS GAVSAANNHG GNDERKEVQT YSRSQNGEQD EDGDGECKEE NHYWADKDQI ADSIRNLAAL HDALWKELKS FQELGKESLP LPSDKPKNEN
301: CREEKSSSPE SQVLILKQKV KDLQHKLEEA RADLNEKEAR IQELEYSKIE SELEGVFRRR MEAEIKHLVL TRSLSPSLQV LEEQQPSKVH SLTEDPEPNR
401: GNLLGKTCKS SFYFLIQLIL LVFILRLLVL QCSPASRLVI PPT

Best Arabidopsis Sequence Match ( AT3G13360.2 )
(BLAST)

001: MFFFSCVCRI ISSTLIIFVD TASPGNNVGG FLRRTLNSLG FCFSCSSVTQ ASSRWIVLGM NESVPDSVED NGNSVPANGL LVLPDNDHEE GGVGSPQRSN
101: SVESPGGSVH STRKGFGLKK WRRIKRDGPV RDEAAPVDDG SKLLKRGLAG LVNPPSKHVE FSSVEARQSS EGSVGSVNMV HHPGVANGFS PDIGCMFAVG
201: QAFEKSEEHS GNTIGGKNVV GGKVVSGSQE KLWSDTIKRA SEERGDIEKE KPCSSLDSDL RSSDFVFSTG SVSVGNHGEK DERLTMNYIG GFSNEGQVKE
301: EVQTYSRSEN GNKEDDGESK KNNNHWADKD ALADSIRSFA VLQEVLWKEV QSFQELGKES VLLHSNTDEL SSDQPSHQNC KEDNSTSSGS KALILKEKVK
401: LLEHKLEEAR AALEAKEARI QELENSKIES ELECIFQRKI ETEIEHLMLT RSLSSLQVLQ ETKKLHSLKE DPVSNRGNIL GKTCKLGFYI LTQLILLVSI
501: LRFLVLQFSP ASRLVIPT

Arabidopsis Description

WIP3WPP domain interacting protein 3 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSR4]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.