Subcellular Localization
min:
: max
Winner_takes_all: cytosol, nucleus, golgi
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX82542 | Canola | plastid | 85.0 | 80.59 |
| CDY43354 | Canola | cytosol, golgi, nucleus | 56.9 | 59.9 |
| CDY24192 | Canola | plastid | 40.95 | 56.77 |
| AT3G13360.2 | Thale cress | extracellular, plasma membrane, vacuole | 57.62 | 46.72 |
| VIT_19s0015g01790.t01 | Wine grape | nucleus | 34.76 | 23.78 |
| CDY17403 | Canola | nucleus | 15.48 | 23.55 |
| PGSC0003DMT400022426 | Potato | nucleus | 31.19 | 22.35 |
| CDX89333 | Canola | nucleus | 26.19 | 22.22 |
| CDY32806 | Canola | cytosol, golgi, nucleus | 14.76 | 22.22 |
| KRH62532 | Soybean | endoplasmic reticulum | 30.95 | 22.22 |
| Os04t0471300-01 | Rice | cytosol, golgi, nucleus | 15.24 | 21.19 |
| KRH56393 | Soybean | cytosol | 29.52 | 21.12 |
| PGSC0003DMT400056956 | Potato | nucleus | 30.0 | 21.07 |
| CDX94330 | Canola | nucleus | 24.29 | 20.77 |
| Solyc07g066170.2.1 | Tomato | nucleus | 16.19 | 20.3 |
| TraesCS2B01G351300.1 | Wheat | cytosol, golgi, nucleus | 14.29 | 20.13 |
| TraesCS7B01G135800.1 | Wheat | cytosol, golgi, nucleus | 25.0 | 19.52 |
| GSMUA_Achr4P01630_001 | Banana | cytosol, golgi, nucleus | 27.14 | 19.16 |
| GSMUA_Achr10P... | Banana | cytosol | 22.86 | 19.05 |
| Zm00001d020879_P001 | Maize | cytosol, golgi, nucleus, plastid | 18.1 | 18.95 |
| TraesCS7A01G240200.1 | Wheat | cytosol | 24.29 | 18.75 |
| TraesCS5B01G256500.1 | Wheat | cytosol, golgi, nucleus, plastid | 24.29 | 18.68 |
| Zm00001d003334_P001 | Maize | cytosol, nucleus, plastid | 13.57 | 18.51 |
| GSMUA_Achr3P04120_001 | Banana | nucleus | 25.71 | 18.18 |
| TraesCS5A01G257000.1 | Wheat | cytosol, golgi, nucleus, plastid | 23.57 | 18.17 |
| HORVU5Hr1G071910.1 | Barley | nucleus | 23.57 | 18.07 |
| TraesCS7D01G238200.1 | Wheat | cytosol | 23.1 | 18.06 |
| Zm00001d005997_P002 | Maize | plastid | 22.86 | 17.84 |
| EES14314 | Sorghum | nucleus | 21.43 | 17.79 |
| Os08t0497900-01 | Rice | nucleus | 19.52 | 17.75 |
| OQU81760 | Sorghum | nucleus | 17.86 | 17.61 |
| HORVU7Hr1G048940.3 | Barley | cytosol | 23.81 | 17.51 |
| TraesCS5D01G265600.1 | Wheat | nucleus | 22.62 | 17.21 |
| EER96942 | Sorghum | cytosol, golgi, nucleus, plastid | 21.9 | 16.97 |
| HORVU2Hr1G081800.3 | Barley | cytosol, nucleus | 18.57 | 16.88 |
| Os09t0481300-01 | Rice | nucleus | 20.48 | 16.32 |
| TraesCS2A01G331000.1 | Wheat | cytosol | 18.33 | 15.1 |
| TraesCS2D01G332000.1 | Wheat | cytosol | 18.33 | 15.1 |
| Zm00001d025667_P001 | Maize | cytosol | 17.14 | 14.75 |
Protein Annotations
| EnsemblPlants:CDX75706 | EnsemblPlantsGene:GSBRNA2T00123614001 | GO:A0A078CEV8 | ncoils:Coil | PANTHER:PTHR34562 | PANTHER:PTHR34562:SF1 |
| ProteinID:CDX75706 | ProteinID:CDX75706.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EE1479 | MapMan:20.4.2.1.2 |
Description
BnaC03g37890D
Coordinates
chrLK031805:-:33138..34663
Molecular Weight (calculated)
46314.3 Da
IEP (calculated)
6.518
GRAVY (calculated)
-0.682
Length
420 amino acids
Sequence
(BLAST)
(BLAST)
001: MNHSVPESVE GIGSPQRSNS VDSLKAETPT RKGFGLKKWR RIKRDGPVKA EATTTPADDE GSKLLKRGLT GLVNPPLKHV DLSSVEARQS SEGSVGSVNM
101: AVHHHHHLQG VANGFSPDPS FMFSVGQGFE KSEEGSGNSV AAKNVVGGKI VSGSEGKIWR DTIKNASQKP CSSMDSDLRS SDFVFSSGAV SAANNHGGND
201: ERKEVQTHSR SENGEQDEDE DGDGECKEEN HYWADKDQIA DSIRNLAALH DALWKELKSF QELGKESLPL PSDKPRNENC REEKSTSSGS QVLILKQKVK
301: HLQHKLEEAR ADLNEKEARI QELEYSKIES ELEGVFRRRM EAEIKHLVLT RSLSSSLQVL EEQPSKVLSL TEDPEPNRGN LLGKTCKSSF YFLTQLILLV
401: FILRLLVLQC SPASRLVIPT
101: AVHHHHHLQG VANGFSPDPS FMFSVGQGFE KSEEGSGNSV AAKNVVGGKI VSGSEGKIWR DTIKNASQKP CSSMDSDLRS SDFVFSSGAV SAANNHGGND
201: ERKEVQTHSR SENGEQDEDE DGDGECKEEN HYWADKDQIA DSIRNLAALH DALWKELKSF QELGKESLPL PSDKPRNENC REEKSTSSGS QVLILKQKVK
301: HLQHKLEEAR ADLNEKEARI QELEYSKIES ELEGVFRRRM EAEIKHLVLT RSLSSSLQVL EEQPSKVLSL TEDPEPNRGN LLGKTCKSSF YFLTQLILLV
401: FILRLLVLQC SPASRLVIPT
001: MNESVPDSVE DNGNSVPANG LLVLPDNDHE EGGVGSPQRS NSVESPGGSV HSTRKGFGLK KWRRIKRDGP VRDEAAPVDD GSKLLKRGLA GLVNPPSKHV
101: EFSSVEARQS SEGSVGSVNM VHHPGVANGF SPDIGCMFAV GQAFEKSEEH SGNTIGGKNV VGGKVVSGSQ EKLWSDTIKR ASEERGDIEK EKPCSSLDSD
201: LRSSDFVFST GSVSVGNHGE KDERLTMNYI GGFSNEGQVK EEVQTYSRSE NGNKEDDGES KKNNNHWADK DALADSIRSF AVLQEVLWKE VQSFQELGKE
301: SVLLHSNTDE LSSDQPSHQN CKEDNSTSSG SKALILKEKV KLLEHKLEEA RAALEAKEAR IQELENSKIE SELECIFQRK IETEIEHLML TRSLSSLQVL
401: QETKKLHSLK EDPVSNRGNI LGKTCKLGFY ILTQLILLVS ILRFLVLQFS PASRLVIPT
101: EFSSVEARQS SEGSVGSVNM VHHPGVANGF SPDIGCMFAV GQAFEKSEEH SGNTIGGKNV VGGKVVSGSQ EKLWSDTIKR ASEERGDIEK EKPCSSLDSD
201: LRSSDFVFST GSVSVGNHGE KDERLTMNYI GGFSNEGQVK EEVQTYSRSE NGNKEDDGES KKNNNHWADK DALADSIRSF AVLQEVLWKE VQSFQELGKE
301: SVLLHSNTDE LSSDQPSHQN CKEDNSTSSG SKALILKEKV KLLEHKLEEA RAALEAKEAR IQELENSKIE SELECIFQRK IETEIEHLML TRSLSSLQVL
401: QETKKLHSLK EDPVSNRGNI LGKTCKLGFY ILTQLILLVS ILRFLVLQFS PASRLVIPT
Arabidopsis Description
WIP3WPP domain interacting protein 3 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSR4]
SUBAcon: [cytosol,nucleus,golgi]
SUBAcon: [cytosol,nucleus,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.