Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 3
- golgi 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27341663
|
msms PMID:
27341663
doi
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER88850 | Sorghum | plastid | 93.46 | 90.36 |
| Os06t0687600-00 | Rice | golgi | 79.13 | 75.6 |
| TraesCS7D01G432300.1 | Wheat | golgi, mitochondrion | 78.19 | 74.04 |
| TraesCS7B01G341900.1 | Wheat | golgi, mitochondrion | 78.19 | 73.39 |
| TraesCS7A01G443100.1 | Wheat | golgi, mitochondrion | 77.88 | 73.31 |
| HORVU7Hr1G100750.3 | Barley | endoplasmic reticulum | 73.52 | 69.62 |
| Zm00001d015307_P001 | Maize | golgi, mitochondrion, plastid | 67.6 | 67.18 |
| Zm00001d003239_P001 | Maize | cytosol | 30.53 | 58.68 |
| GSMUA_Achr9P25260_001 | Banana | golgi | 59.19 | 57.93 |
| GSMUA_Achr6P29610_001 | Banana | endoplasmic reticulum, golgi, plastid | 58.26 | 57.36 |
| GSMUA_Achr8P03360_001 | Banana | golgi | 57.63 | 56.4 |
| VIT_03s0063g00030.t01 | Wine grape | plastid | 38.32 | 55.91 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane, plastid | 48.29 | 53.82 |
| Zm00001d002066_P001 | Maize | plasma membrane | 53.89 | 51.64 |
| PGSC0003DMT400066571 | Potato | endoplasmic reticulum, golgi, mitochondrion, plastid | 47.66 | 48.73 |
| Solyc01g107800.2.1 | Tomato | endoplasmic reticulum, golgi, mitochondrion, plastid | 47.04 | 48.09 |
| VIT_07s0031g00110.t01 | Wine grape | golgi | 45.48 | 47.1 |
| PGSC0003DMT400065494 | Potato | golgi, plasma membrane, plastid | 43.61 | 46.36 |
| CDX81329 | Canola | plastid | 43.61 | 45.45 |
| KRH28432 | Soybean | mitochondrion | 43.3 | 45.13 |
| KRH77040 | Soybean | mitochondrion | 42.68 | 45.07 |
| KRH50341 | Soybean | golgi, plastid | 43.61 | 45.02 |
| AT5G67210.1 | Thale cress | endoplasmic reticulum, golgi, mitochondrion, plastid | 44.24 | 44.8 |
| PGSC0003DMT400064322 | Potato | plastid | 42.68 | 44.48 |
| CDY12819 | Canola | golgi, mitochondrion, plasma membrane, plastid | 43.61 | 44.44 |
| Bra036059.1-P | Field mustard | endoplasmic reticulum, golgi, plastid | 44.86 | 44.44 |
| AT3G50220.1 | Thale cress | endoplasmic reticulum, golgi | 44.55 | 44.41 |
| CDY30600 | Canola | endoplasmic reticulum, golgi | 44.55 | 44.14 |
| CDY17753 | Canola | endoplasmic reticulum, golgi | 44.55 | 44.14 |
| Bra012143.1-P | Field mustard | plastid | 43.3 | 44.13 |
| Solyc02g093090.1.1 | Tomato | extracellular, nucleus | 42.06 | 43.83 |
| CDY01429 | Canola | golgi, mitochondrion, plasma membrane, plastid | 42.99 | 43.81 |
| KRH70689 | Soybean | plastid | 43.3 | 43.03 |
| KRH57814 | Soybean | mitochondrion | 41.43 | 42.09 |
| KRH04549 | Soybean | plastid | 40.81 | 41.59 |
| Bra013107.1-P | Field mustard | plastid | 39.88 | 39.02 |
| CDY13145 | Canola | plastid | 39.88 | 39.02 |
| Bra039840.1-P | Field mustard | plastid | 39.25 | 38.77 |
| CDY62313 | Canola | plastid | 38.63 | 38.75 |
| CDX89660 | Canola | plastid | 39.88 | 38.67 |
| AT2G15440.1 | Thale cress | plastid | 39.56 | 38.6 |
| CDY37228 | Canola | plastid | 38.01 | 37.77 |
| Zm00001d041782_P001 | Maize | plasma membrane | 33.96 | 36.58 |
| Zm00001d028737_P001 | Maize | golgi | 19.0 | 36.09 |
| Zm00001d023950_P001 | Maize | mitochondrion | 33.33 | 34.63 |
| Zm00001d007327_P001 | Maize | plasma membrane | 31.78 | 33.22 |
| Zm00001d007269_P001 | Maize | mitochondrion, plastid | 31.78 | 31.19 |
| Zm00001d001763_P001 | Maize | plasma membrane | 27.1 | 30.96 |
| Zm00001d027968_P001 | Maize | cytosol, mitochondrion, plastid | 20.87 | 21.61 |
Protein Annotations
| EntrezGene:100273350 | MapMan:35.1 | UniProt:A0A1D6GU18 | ProteinID:AQK66482.1 | GO:GO:0005575 | GO:GO:0005975 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0045492 | InterPro:IRX15/IRX15L/IGXM | PFAM:PF04669 | PANTHER:PTHR31444 | PANTHER:PTHR31444:SF19 | InterPro:Polysacc_synth_dom |
| TIGRFAMs:TIGR01627 | TMHMM:TMhelix | UniParc:UPI000220ABA8 | EnsemblPlantsGene:Zm00001d014532 | EnsemblPlants:Zm00001d014532_P001 | EnsemblPlants:Zm00001d014532_T001 |
| SEG:seg | : | : | : | : | : |
Description
Protein IRX15-LIKE
Coordinates
chr5:-:52026738..52028300
Molecular Weight (calculated)
33776.1 Da
IEP (calculated)
8.328
GRAVY (calculated)
0.030
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGLSGAKLL VVHPSSNKSP GGAGSPGAVL GARRRVCAAV FLACFACVSL ATTLLSAARD PAGAGARSAA FAVPVAAAAR EGQGLPGHVF DALVQYASAG
101: GNSTASMPGA DVRAIAAVLR RRAPCSLLVF GLGAETPLWR ALNHGGRTVF LDENQYYVSH LEGRHPGLEA YDVAYTTTVR EFPDLLDSAR AARGAECRPV
201: QNLLFSDCRL AINDLPNQLY DVSWDVILVD GPRGYTASSP GRMSAIFTAG VLARTRAGEG VKTDVLVHDY EREVERACSR EFLCEENRVV ETSTRSLAHF
301: VVRGGSSARR DAFCSGTAAA H
101: GNSTASMPGA DVRAIAAVLR RRAPCSLLVF GLGAETPLWR ALNHGGRTVF LDENQYYVSH LEGRHPGLEA YDVAYTTTVR EFPDLLDSAR AARGAECRPV
201: QNLLFSDCRL AINDLPNQLY DVSWDVILVD GPRGYTASSP GRMSAIFTAG VLARTRAGEG VKTDVLVHDY EREVERACSR EFLCEENRVV ETSTRSLAHF
301: VVRGGSSARR DAFCSGTAAA H
001: MKNGSGNTNT KLILLHPYIQ KQTSTTRLWL LAFVSFFTIV FLLTLLYTRD TIPSKNTSVA AAVAAVVTGG STPSASSPIS NSNLPTSAIN ALLHYASRSN
101: DSFHMSYGEM KSISDVLRRC APPCNLLVFG LTHETLLWKS LNHNGRTVFI EENRYYAAYF EEIHPEIDVF DVQYTTKAHE AGELVTAAKE AAGNECRPVQ
201: NLLFSDCKLG LNDLPNHVYD VDWDVIFVDG PRGDAHEGPG RMSSIFTAAV LARSKKGGTP KTHVFVHDYY RDVERLCGDE FLCRENLVES NDLLAHYVLD
301: KMDKNSTKFC NGRKKRSVSS LS
101: DSFHMSYGEM KSISDVLRRC APPCNLLVFG LTHETLLWKS LNHNGRTVFI EENRYYAAYF EEIHPEIDVF DVQYTTKAHE AGELVTAAKE AAGNECRPVQ
201: NLLFSDCKLG LNDLPNHVYD VDWDVIFVDG PRGDAHEGPG RMSSIFTAAV LARSKKGGTP KTHVFVHDYY RDVERLCGDE FLCRENLVES NDLLAHYVLD
301: KMDKNSTKFC NGRKKRSVSS LS
Arabidopsis Description
IRX15Protein IRREGULAR XYLEM 15 [Source:UniProtKB/Swiss-Prot;Acc:Q9SNE5]
SUBAcon: [endoplasmic reticulum,golgi]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.