Factsheet for Zm00001d007269_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 2
vacuole 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion, plastid, vacuole
ChloroP:	plastid
MultiLoc:	vacuole
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES08266	Sorghum	mitochondrion	84.1	83.84
TraesCS4B01G089200.1	Wheat	mitochondrion	56.88	57.59
TraesCS4A01G227100.1	Wheat	mitochondrion	56.88	57.41
TraesCS4D01G086700.1	Wheat	mitochondrion	57.19	57.36
Os11t0242600-00	Rice	mitochondrion	53.82	55.7
Zm00001d028737_P001	Maize	golgi	26.91	52.07
Zm00001d041782_P001	Maize	plasma membrane	47.4	52.01
HORVU4Hr1G015310.3	Barley	endoplasmic reticulum, plastid	55.05	50.85
Zm00001d023950_P001	Maize	mitochondrion	47.09	49.84
Zm00001d007327_P001	Maize	plasma membrane	31.8	33.88
Zm00001d014532_P001	Maize	plasma membrane	31.19	31.78
Zm00001d015307_P001	Maize	golgi, mitochondrion, plastid	29.66	30.03
Zm00001d001763_P001	Maize	plasma membrane	25.08	29.18
Zm00001d027968_P001	Maize	cytosol, mitochondrion, plastid	27.22	28.71
Zm00001d002066_P001	Maize	plasma membrane	28.75	28.06
Zm00001d003239_P001	Maize	cytosol	13.46	26.35

Protein Annotations

EnsemblPlants:Zm00001d007269_P001	EnsemblPlants:Zm00001d007269_T001	EnsemblPlantsGene:Zm00001d007269	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0045492	InterPro:IRX15/IRX15L/IGXM	InterPro:Polysacc_synth_dom	PANTHER:PTHR31444
PANTHER:PTHR31444:SF5	PFAM:PF04669	ProteinID:ONM26428.1	SEG:seg	TIGRFAMs:TIGR01627	TMHMM:TMhelix
UniParc:UPI000220A957	UniProt:A0A1D6F557	MapMan:35.1	:	:	:

Description

Plant-specific domain TIGR01627 family protein

Coordinates

chr2:+:226230249..226231232

Molecular Weight (calculated)

34712.3 Da

IEP (calculated)

7.483

GRAVY (calculated)

-0.039

Length

327 amino acids

Sequence
(BLAST)

001: MTSPMHARKA KLKTHFISAK AKLKHNVTPR RVVLLAAAAT SAFLLLFTLR TLHSAASRSA RASAAATVAA AIASTSPASV AADHADQLEQ HHHQECAKVP
101: SSVAEALVHY ATSNETPHQT VAEAGAAARV LARRAPCSLL VLGLGPDSAL WAALNHGGRT LFLEADAGRI ASARAAHSAG IDLQAHPVAF QQEAMTPSDD
201: LLALRNSSDC AASPPKPLTV DHLEQSPCTL APRGLPETFY EAEWDVIMVN APVPGAIYTA AVAARARRPG TGETDVLVHG VDDTTEESFA RAFLCEPYLK
301: EEASRLRHFS IPSHMDKDAM PFCPLIR

Best Arabidopsis Sequence Match ( AT4G09990.1 )
(BLAST)

001: MRNKSQSFIS SKLIFICCSI LVLFILFLKR ASFSSNSTAT IRDEYHQKSK CPSTPQQCTK LPTSLSDALV HYVTSEITPQ QTFDEVSVSK RVLDKKSPCN
101: FLVFGLGHDS LMWASLNHGG RTLFLEEDEA WIETVTKKFP NLESYHVVYD TKVKDSNKLM ELKRTEDCKA VSDPRDSKCA LSLKGFPADV YETQWDVIMV
201: DAPTGYHDEA PGRMSAIYTA GLLARNRYDG GETDVFVHDI NRPVEDEFSV AFLCGGYMKE QQGRLRHFNI PSHRASFGTP FCPADISRRF

Arabidopsis Description

GXM2Glucuronoxylan 4-O-methyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0F7]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.