Factsheet for Os11t0242600-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
vacuole 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0200500-01
Os02t0509600-01
Os04t0471300-01
Os05t0520100-00
Os08t0497900-01
Os09t0481300-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G33800.1	Os02t0509600-01	AT1G27300.1	21798944
AT1G33800.1	Os01t0200500-01	AT3G16310.1	21798944
AT1G33800.1	Os05t0520100-00	AT3G16310.1	21798944
AT1G33800.1	Os04t0471300-01	AT4G26455.1	21798944
AT1G33800.1	Os08t0497900-01	AT4G26455.1	21798944
AT1G33800.1	Os09t0481300-01	AT4G26455.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G227100.1	Wheat	mitochondrion	60.13	58.64
TraesCS4D01G086700.1	Wheat	mitochondrion	59.49	57.67
EES08266	Sorghum	mitochondrion	59.81	57.62
TraesCS4B01G089200.1	Wheat	mitochondrion	58.86	57.59
Zm00001d007269_P001	Maize	mitochondrion, plastid	55.7	53.82
HORVU4Hr1G015310.3	Barley	endoplasmic reticulum, plastid	59.49	53.11
Os12t0204500-01	Rice	endoplasmic reticulum, golgi	47.78	51.19
GSMUA_Achr8P29140_001	Banana	endoplasmic reticulum, golgi	39.24	44.44
Solyc01g103360.2.1	Tomato	plasma membrane	35.13	40.36
CDY31075	Canola	endoplasmic reticulum, golgi, plasma membrane	35.44	39.86
Bra030789.1-P	Field mustard	endoplasmic reticulum, golgi	35.13	39.5
KRH50678	Soybean	cytosol	8.86	39.44
AT1G09610.1	Thale cress	endoplasmic reticulum, golgi	35.13	39.36
AT4G09990.1	Thale cress	golgi	36.08	39.31
KRH06044	Soybean	endoplasmic reticulum, golgi, vacuole	34.81	39.29
CDY20685	Canola	endoplasmic reticulum, golgi, plasma membrane	34.81	39.15
PGSC0003DMT400064018	Potato	plasma membrane	34.18	39.13
Solyc11g031950.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	36.08	38.78
CDY15292	Canola	golgi	36.08	38.51
CDX93751	Canola	golgi	36.08	38.51
Bra028013.1-P	Field mustard	golgi	36.08	38.51
GSMUA_Achr10P...	Banana	endoplasmic reticulum, golgi	30.7	38.49
VIT_12s0035g01340.t01	Wine grape	golgi	34.49	38.38
AT1G33800.1	Thale cress	golgi, plasma membrane	35.76	38.05
Bra034460.1-P	Field mustard	golgi, plasma membrane, vacuole	35.76	38.05
VIT_00s0238g00020.t01	Wine grape	extracellular, plasma membrane	36.08	38.0
VIT_12s0035g01170.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	34.81	37.93
Solyc06g064800.1.1	Tomato	extracellular, golgi	31.65	37.88
Bra016131.1-P	Field mustard	endoplasmic reticulum, extracellular	35.44	37.84
CDX96332	Canola	endoplasmic reticulum, extracellular	35.44	37.84
CDY48797	Canola	golgi, plasma membrane	35.44	37.71
PGSC0003DMT400080082	Potato	endoplasmic reticulum, golgi	36.39	37.34
AT1G71690.1	Thale cress	endoplasmic reticulum, golgi, plastid	34.81	37.29
CDX72815	Canola	endoplasmic reticulum, extracellular	34.81	36.54
KRH64803	Soybean	golgi, plasma membrane	33.86	34.97
CDY37946	Canola	extracellular	28.48	33.96
Os11t0490100-01	Rice	plasma membrane	30.7	32.12
VIT_00s0238g00030.t01	Wine grape	extracellular, plasma membrane	24.05	31.41
KRH50677	Soybean	mitochondrion	10.76	30.91
Os04t0649900-01	Rice	mitochondrion	30.7	30.5
Os06t0687600-00	Rice	golgi	31.33	29.46
Os02t0158500-00	Rice	plastid	30.7	24.74
Os11t0488500-01	Rice	cytosol, nucleus	11.39	11.08

Protein Annotations

MapMan:35.1	EntrezGene:4350174	ProteinID:AAX95976.1	ProteinID:ABA92336.1	ProteinID:BAF27954.1	ProteinID:BAT13390.1
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0045492
InterPro:IRX15/IRX15L/IGXM	EnsemblPlantsGene:Os11g0242600	EnsemblPlants:Os11t0242600-00	PFAM:PF04669	PANTHER:PTHR31444	PANTHER:PTHR31444:SF5
InterPro:Polysacc_synth_dom	UniProt:Q53N85	TIGRFAMs:TIGR01627	TMHMM:TMhelix	UniParc:UPI000050934A	RefSeq:XP_015616037.1
SEG:seg	:	:	:	:	:

Description

Protein of unknown function DUF579, plant family protein. (Os11t0242600-00)

Coordinates

chr11:-:7651046..7652401

Molecular Weight (calculated)

33525.0 Da

IEP (calculated)

9.040

GRAVY (calculated)

-0.027

Length

316 amino acids

Sequence
(BLAST)

001: MASPMHARRA KLKSQLVSAK AKLKHHVTPR RLLLLSAAAA SAFLLLLTLR TLSAAAANTS SPAPVVVHRS QQQQRDDQCD RVPAGVAEAL VHYATSNATA
101: WGRGRRRSAE EVAATARAVS RRAPCNLLVF GLGHGAALWA ALNHGGRTVF LEEDDALVSG ASPASLAIEA YRVAYLASAA DADELLALRD SEHCTGAAAT
201: QLSPGHFDRS PCKLAVRGLP AAFYEAEWDV IVVDAHAPPP PTTTAMMGAI YTAAVAARAR RPAAETETDV VVHDVDKPVQ DRFSTAFLCG GYLKEGVGNL
301: RRFAIPSHKE GMPFCP

Best Arabidopsis Sequence Match ( AT4G09990.1 )
(BLAST)

001: MRNKSQSFIS SKLIFICCSI LVLFILFLKR ASFSSNSTAT IRDEYHQKSK CPSTPQQCTK LPTSLSDALV HYVTSEITPQ QTFDEVSVSK RVLDKKSPCN
101: FLVFGLGHDS LMWASLNHGG RTLFLEEDEA WIETVTKKFP NLESYHVVYD TKVKDSNKLM ELKRTEDCKA VSDPRDSKCA LSLKGFPADV YETQWDVIMV
201: DAPTGYHDEA PGRMSAIYTA GLLARNRYDG GETDVFVHDI NRPVEDEFSV AFLCGGYMKE QQGRLRHFNI PSHRASFGTP FCPADISRRF

Arabidopsis Description

GXM2Glucuronoxylan 4-O-methyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0F7]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.