Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 5
- vacuole 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G089200.1 | Wheat | mitochondrion | 97.22 | 97.52 |
| TraesCS4D01G086700.1 | Wheat | mitochondrion | 97.22 | 96.63 |
| HORVU4Hr1G015310.3 | Barley | endoplasmic reticulum, plastid | 93.52 | 85.59 |
| TraesCS7A01G560100.1 | Wheat | mitochondrion, plastid | 58.02 | 62.25 |
| TraesCS5A01G313000.1 | Wheat | mitochondrion | 56.79 | 61.54 |
| Os11t0242600-00 | Rice | mitochondrion | 58.64 | 60.13 |
| EES08266 | Sorghum | mitochondrion | 58.95 | 58.23 |
| Zm00001d007269_P001 | Maize | mitochondrion, plastid | 57.41 | 56.88 |
| GSMUA_Achr8P29140_001 | Banana | endoplasmic reticulum, golgi | 43.21 | 50.18 |
| KRH06044 | Soybean | endoplasmic reticulum, golgi, vacuole | 41.36 | 47.86 |
| AT1G09610.1 | Thale cress | endoplasmic reticulum, golgi | 41.36 | 47.52 |
| CDY31075 | Canola | endoplasmic reticulum, golgi, plasma membrane | 40.74 | 46.98 |
| Solyc01g103360.2.1 | Tomato | plasma membrane | 39.81 | 46.91 |
| Bra030789.1-P | Field mustard | endoplasmic reticulum, golgi | 40.43 | 46.62 |
| CDY20685 | Canola | endoplasmic reticulum, golgi, plasma membrane | 40.12 | 46.26 |
| AT4G09990.1 | Thale cress | golgi | 41.36 | 46.21 |
| AT1G33800.1 | Thale cress | golgi, plasma membrane | 42.28 | 46.13 |
| VIT_12s0035g01340.t01 | Wine grape | golgi | 40.43 | 46.13 |
| VIT_12s0035g01170.t01 | Wine grape | endoplasmic reticulum, golgi, vacuole | 41.05 | 45.86 |
| Solyc11g031950.1.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 41.36 | 45.58 |
| PGSC0003DMT400064018 | Potato | plasma membrane | 38.58 | 45.29 |
| Bra034460.1-P | Field mustard | golgi, plasma membrane, vacuole | 41.36 | 45.12 |
| KRH50678 | Soybean | cytosol | 9.88 | 45.07 |
| CDX96332 | Canola | endoplasmic reticulum, extracellular | 41.05 | 44.93 |
| Bra016131.1-P | Field mustard | endoplasmic reticulum, extracellular | 41.05 | 44.93 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, golgi | 34.88 | 44.84 |
| CDY48797 | Canola | golgi, plasma membrane | 41.05 | 44.78 |
| CDY15292 | Canola | golgi | 40.74 | 44.59 |
| CDX93751 | Canola | golgi | 40.74 | 44.59 |
| Bra028013.1-P | Field mustard | golgi | 40.74 | 44.59 |
| VIT_00s0238g00020.t01 | Wine grape | extracellular, plasma membrane | 41.05 | 44.33 |
| CDX72815 | Canola | endoplasmic reticulum, extracellular | 41.05 | 44.19 |
| AT1G71690.1 | Thale cress | endoplasmic reticulum, golgi, plastid | 39.81 | 43.73 |
| PGSC0003DMT400080082 | Potato | endoplasmic reticulum, golgi | 41.36 | 43.51 |
| Solyc06g064800.1.1 | Tomato | extracellular, golgi | 34.57 | 42.42 |
| KRH64803 | Soybean | golgi, plasma membrane | 39.2 | 41.5 |
| CDY37946 | Canola | extracellular | 32.41 | 39.62 |
| VIT_00s0238g00030.t01 | Wine grape | extracellular, plasma membrane | 28.09 | 37.6 |
| TraesCS2A01G381200.1 | Wheat | extracellular | 33.02 | 36.27 |
| TraesCS2A01G512400.1 | Wheat | golgi | 33.33 | 34.18 |
| KRH50677 | Soybean | mitochondrion | 11.42 | 33.64 |
| TraesCS7A01G443100.1 | Wheat | golgi, mitochondrion | 35.19 | 33.43 |
| TraesCS1A01G365400.1 | Wheat | golgi | 28.09 | 32.97 |
| TraesCS6A01G131900.1 | Wheat | mitochondrion | 32.1 | 31.71 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G227100.1 | EnsemblPlantsGene:TraesCS4A01G227100 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045492 | InterPro:IRX15/IRX15L/IGXM | InterPro:Polysacc_synth_dom | PANTHER:PTHR31444 | PANTHER:PTHR31444:SF5 |
| PFAM:PF04669 | SEG:seg | TIGRFAMs:TIGR01627 | TMHMM:TMhelix | MapMan:21.2.2.2.3 | : |
Description
No Description!
Coordinates
chr4A:+:535425668..535426642
Molecular Weight (calculated)
34420.2 Da
IEP (calculated)
7.903
GRAVY (calculated)
-0.115
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSPTLARKA KLKNHLVSAK AKLRQHVTLR RIVLVAAASA AAFILLLTVR TLSASHARSP GAASSTTSPP EAVRRNTQQQ QQGGCAKLPG PVAEALVHYA
101: TANATLPQTA AEVAMTARLL AQRAPCNLLV FGGLGPDSAL WAALNHGGRT AFLEEDAALI TEVGARHPGL GLESHQVAYQ TTLADADELL GLRGSPDCTA
201: SPPKDHPLSP DHFEGSPCKL AMRGLPAAFY ETEWDVIMVD APTGWVPEAP GRVGGAIYMA GMAARARRPG SGETEVLVHD VDRTVEDSFS RAFLCAGYLE
301: EEVGRLRRFA IPSHREKEGM PFCP
101: TANATLPQTA AEVAMTARLL AQRAPCNLLV FGGLGPDSAL WAALNHGGRT AFLEEDAALI TEVGARHPGL GLESHQVAYQ TTLADADELL GLRGSPDCTA
201: SPPKDHPLSP DHFEGSPCKL AMRGLPAAFY ETEWDVIMVD APTGWVPEAP GRVGGAIYMA GMAARARRPG SGETEVLVHD VDRTVEDSFS RAFLCAGYLE
301: EEVGRLRRFA IPSHREKEGM PFCP
001: MRPKANQNHK LKVLLVFLLA TLILIFIVRS TLTSSQEHQT PQETRSTRCS GACNKLPRSL AQALIHYSTS VITPQQTLKE IAVSSRVLGK KSPCNFLVFG
101: LGHDSLMWSS LNYGGRTVFL EEDEAWIKQI KRRFPMLESY HVTYDSKVNQ ADNLIEVGKG PECTAIGDPR YSMCQLALKG LPAEIYETGW DLIMVDAPTG
201: YYDEAPGRMT AIYTAGMMAR NRKQGGETDV FVHDVNREIE DKFSKAFLCE GYMKKQEGRL RHFIIPSYRD GSESESNRPF CP
101: LGHDSLMWSS LNYGGRTVFL EEDEAWIKQI KRRFPMLESY HVTYDSKVNQ ADNLIEVGKG PECTAIGDPR YSMCQLALKG LPAEIYETGW DLIMVDAPTG
201: YYDEAPGRMT AIYTAGMMAR NRKQGGETDV FVHDVNREIE DKFSKAFLCE GYMKKQEGRL RHFIIPSYRD GSESESNRPF CP
Arabidopsis Description
GXM1GXM3 [Source:UniProtKB/TrEMBL;Acc:A0A178W7U8]
SUBAcon: [endoplasmic reticulum,golgi]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.