Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G33800.1 | Thale cress | golgi, plasma membrane | 76.21 | 74.41 |
| VIT_00s0238g00020.t01 | Wine grape | extracellular, plasma membrane | 63.1 | 61.0 |
| AT1G09610.1 | Thale cress | endoplasmic reticulum, golgi | 56.9 | 58.51 |
| Solyc11g031950.1.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 57.24 | 56.46 |
| GSMUA_Achr8P29140_001 | Banana | endoplasmic reticulum, golgi | 53.45 | 55.56 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, golgi | 48.28 | 55.56 |
| PGSC0003DMT400080082 | Potato | endoplasmic reticulum, golgi | 58.97 | 55.52 |
| KRH64803 | Soybean | golgi, plasma membrane | 57.93 | 54.9 |
| VIT_00s0238g00030.t01 | Wine grape | extracellular, plasma membrane | 45.52 | 54.55 |
| AT1G71690.1 | Thale cress | endoplasmic reticulum, golgi, plastid | 54.83 | 53.9 |
| HORVU5Hr1G080580.1 | Barley | endoplasmic reticulum, mitochondrion, plastid | 51.03 | 49.33 |
| TraesCS5D01G319700.1 | Wheat | mitochondrion | 50.69 | 49.33 |
| TraesCS7B01G485000.1 | Wheat | mitochondrion, plastid | 51.03 | 49.17 |
| TraesCS5A01G313000.1 | Wheat | mitochondrion | 50.69 | 49.16 |
| TraesCS7A01G560100.1 | Wheat | mitochondrion, plastid | 51.03 | 49.01 |
| TraesCS5B01G313900.1 | Wheat | golgi, unclear | 50.34 | 48.67 |
| Solyc06g064800.1.1 | Tomato | extracellular, golgi | 44.14 | 48.48 |
| TraesCS7D01G549800.1 | Wheat | mitochondrion, plastid | 51.03 | 48.37 |
| EES16857 | Sorghum | mitochondrion | 49.66 | 47.52 |
| Os12t0204500-01 | Rice | endoplasmic reticulum, golgi | 47.93 | 47.12 |
| HORVU7Hr1G120340.1 | Barley | plastid | 51.03 | 41.46 |
| TraesCS4A01G227100.1 | Wheat | mitochondrion | 46.21 | 41.36 |
| TraesCS4B01G089200.1 | Wheat | mitochondrion | 45.86 | 41.18 |
| TraesCS4D01G086700.1 | Wheat | mitochondrion | 46.21 | 41.1 |
| AT1G67330.1 | Thale cress | endoplasmic reticulum, golgi | 40.34 | 40.21 |
| AT1G27930.1 | Thale cress | endoplasmic reticulum, plasma membrane | 38.28 | 38.41 |
| HORVU4Hr1G015310.3 | Barley | endoplasmic reticulum, plastid | 46.55 | 38.14 |
| Os11t0242600-00 | Rice | mitochondrion | 39.31 | 36.08 |
| EES08266 | Sorghum | mitochondrion | 40.34 | 35.67 |
| AT3G50220.1 | Thale cress | endoplasmic reticulum, golgi | 31.38 | 28.26 |
| AT5G67210.1 | Thale cress | endoplasmic reticulum, golgi, mitochondrion, plastid | 30.69 | 28.08 |
| AT2G15440.1 | Thale cress | plastid | 30.69 | 27.05 |
| AT4G24910.1 | Thale cress | plastid | 27.59 | 25.4 |
Protein Annotations
| MapMan:21.2.2.2.3 | EntrezGene:826590 | UniProt:A0A178V4H0 | ProteinID:AEE82826.1 | ArrayExpress:AT4G09990 | EnsemblPlantsGene:AT4G09990 |
| RefSeq:AT4G09990 | TAIR:AT4G09990 | RefSeq:AT4G09990-TAIR-G | EnsemblPlants:AT4G09990.1 | TAIR:AT4G09990.1 | EMBL:BT030090 |
| ProteinID:CAB39623.1 | ProteinID:CAB78122.1 | GO:GO:0000139 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005975 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008168 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016740 | GO:GO:0030775 | GO:GO:0032259 | GO:GO:0045491 | GO:GO:0045492 | InterPro:IRX15/IRX15L/IGXM |
| EMBL:JX914595 | RefSeq:NP_192737.1 | ProteinID:OAP01187.1 | PFAM:PF04669 | PO:PO:0000230 | PO:PO:0000256 |
| PO:PO:0000262 | PO:PO:0000293 | PO:PO:0007103 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 |
| PO:PO:0009025 | PO:PO:0009030 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PANTHER:PTHR31444 | PANTHER:PTHR31444:SF2 | InterPro:Polysacc_synth_dom | UniProt:Q9T0F7 | TIGRFAMs:TIGR01627 |
| TMHMM:TMhelix | UniParc:UPI00000AA1A2 | : | : | : | : |
Description
GXM2Glucuronoxylan 4-O-methyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0F7]
Coordinates
chr4:-:6258880..6260259
Molecular Weight (calculated)
32839.0 Da
IEP (calculated)
7.209
GRAVY (calculated)
-0.343
Length
290 amino acids
Sequence
(BLAST)
(BLAST)
001: MRNKSQSFIS SKLIFICCSI LVLFILFLKR ASFSSNSTAT IRDEYHQKSK CPSTPQQCTK LPTSLSDALV HYVTSEITPQ QTFDEVSVSK RVLDKKSPCN
101: FLVFGLGHDS LMWASLNHGG RTLFLEEDEA WIETVTKKFP NLESYHVVYD TKVKDSNKLM ELKRTEDCKA VSDPRDSKCA LSLKGFPADV YETQWDVIMV
201: DAPTGYHDEA PGRMSAIYTA GLLARNRYDG GETDVFVHDI NRPVEDEFSV AFLCGGYMKE QQGRLRHFNI PSHRASFGTP FCPADISRRF
101: FLVFGLGHDS LMWASLNHGG RTLFLEEDEA WIETVTKKFP NLESYHVVYD TKVKDSNKLM ELKRTEDCKA VSDPRDSKCA LSLKGFPADV YETQWDVIMV
201: DAPTGYHDEA PGRMSAIYTA GLLARNRYDG GETDVFVHDI NRPVEDEFSV AFLCGGYMKE QQGRLRHFNI PSHRASFGTP FCPADISRRF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.