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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid

Predictor Summary:
  • plastid 2
  • mitochondrion 3
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 1
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, plastid
Any Predictor:endoplasmic reticulum, golgi, mitochondrion, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Predotar:plastid
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:golgi
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G340600.1
TraesCS1D01G342600.1
TraesCS2A01G331000.1
TraesCS2A01G346700.1
TraesCS2B01G351300.1
TraesCS2B01G365000.1
TraesCS2D01G332000.1
TraesCS2D01G345400.1
TraesCS3A01G274800.1
TraesCS3A01G313000.1
TraesCS3B01G158900.1
TraesCS3B01G308400.1
TraesCS3D01G141300.1
TraesCS3D01G274500.1
TraesCS5A01G257000.1
TraesCS5B01G256500.1
TraesCS5D01G265600.1
TraesCS7A01G240200.1
TraesCS7B01G135800.1
TraesCS7D01G238200.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G33800.1 TraesCS2A01G346700.1 AT1G27300.1 21798944
AT1G33800.1 TraesCS2B01G365000.1 AT1G27300.1 21798944
AT1G33800.1 TraesCS2D01G345400.1 AT1G27300.1 21798944
AT1G33800.1 TraesCS1A01G340600.1 AT3G16310.1 21798944
AT1G33800.1 TraesCS1D01G342600.1 AT3G16310.1 21798944
AT1G33800.1 TraesCS3A01G274800.1 AT3G16310.1 21798944
AT1G33800.1 TraesCS3A01G313000.1 AT3G16310.1 21798944
AT1G33800.1 TraesCS3B01G158900.1 AT3G16310.1 21798944
AT1G33800.1 TraesCS3B01G308400.1 AT3G16310.1 21798944
AT1G33800.1 TraesCS3D01G141300.1 AT3G16310.1 21798944
AT1G33800.1 TraesCS3D01G274500.1 AT3G16310.1 21798944
AT1G33800.1 TraesCS2A01G331000.1 AT4G26455.1 21798944
AT1G33800.1 TraesCS2B01G351300.1 AT4G26455.1 21798944
AT1G33800.1 TraesCS2D01G332000.1 AT4G26455.1 21798944
AT1G33800.1 TraesCS5A01G257000.1 AT4G26455.1 21798944
AT1G33800.1 TraesCS5B01G256500.1 AT4G26455.1 21798944
AT1G33800.1 TraesCS5D01G265600.1 AT4G26455.1 21798944
AT1G33800.1 TraesCS7A01G240200.1 AT4G26455.1 21798944
AT1G33800.1 TraesCS7B01G135800.1 AT4G26455.1 21798944
AT1G33800.1 TraesCS7D01G238200.1 AT4G26455.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7A01G560100.1 Wheat mitochondrion, plastid 96.68 96.36
TraesCS7D01G549800.1 Wheat mitochondrion, plastid 94.35 92.81
TraesCS5B01G313900.1 Wheat golgi, unclear 87.38 87.67
HORVU7Hr1G120340.1 Barley plastid 93.69 78.99
Os12t0204500-01 Rice endoplasmic reticulum, golgi 77.08 78.64
EES16857 Sorghum mitochondrion 77.08 76.57
Zm00001d023950_P001 Maize mitochondrion 77.08 75.08
Zm00001d041782_P001 Maize plasma membrane 73.42 74.16
Zm00001d028737_P001 Maize golgi 39.53 70.41
TraesCS4B01G089200.1 Wheat mitochondrion 63.12 58.82
GSMUA_Achr8P29140_001 Banana endoplasmic reticulum, golgi 53.49 57.71
VIT_12s0035g01340.t01 Wine grape golgi 51.16 54.23
Solyc11g031950.1.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 52.16 53.4
PGSC0003DMT400080082 Potato endoplasmic reticulum, golgi 54.15 52.92
CDY20685 Canola endoplasmic reticulum, golgi, plasma membrane 49.17 52.67
VIT_00s0238g00020.t01 Wine grape extracellular, plasma membrane 52.16 52.33
Bra030789.1-P Field mustard endoplasmic reticulum, golgi 48.84 52.31
AT1G09610.1 Thale cress endoplasmic reticulum, golgi 48.84 52.13
KRH50678 Soybean cytosol 12.29 52.11
CDY31075 Canola endoplasmic reticulum, golgi, plasma membrane 48.51 51.96
GSMUA_Achr10P... Banana endoplasmic reticulum, golgi 42.86 51.19
AT4G09990.1 Thale cress golgi 49.17 51.03
VIT_12s0035g01170.t01 Wine grape endoplasmic reticulum, golgi, vacuole 49.17 51.03
Solyc01g103360.2.1 Tomato plasma membrane 46.51 50.91
Bra016131.1-P Field mustard endoplasmic reticulum, extracellular 49.83 50.68
CDX93751 Canola golgi 49.83 50.68
Bra028013.1-P Field mustard golgi 49.83 50.68
CDX96332 Canola endoplasmic reticulum, extracellular 49.83 50.68
CDY15292 Canola golgi 49.83 50.68
AT1G71690.1 Thale cress endoplasmic reticulum, golgi, plastid 49.5 50.51
CDY48797 Canola golgi, plasma membrane 49.83 50.51
Bra034460.1-P Field mustard golgi, plasma membrane, vacuole 49.5 50.17
KRH06044 Soybean endoplasmic reticulum, golgi, vacuole 46.51 50.0
CDX72815 Canola endoplasmic reticulum, extracellular 49.83 49.83
AT1G33800.1 Thale cress golgi, plasma membrane 49.17 49.83
PGSC0003DMT400064018 Potato plasma membrane 45.18 49.28
Solyc06g064800.1.1 Tomato extracellular, golgi 41.53 47.35
KRH64803 Soybean golgi, plasma membrane 47.84 47.06
CDY37946 Canola extracellular 39.2 44.53
TraesCS3B01G545900.1 Wheat extracellular 41.53 42.66
TraesCS2B01G398500.1 Wheat extracellular 41.2 42.03
VIT_00s0238g00030.t01 Wine grape extracellular, plasma membrane 33.55 41.74
Zm00001d027968_P001 Maize cytosol, mitochondrion, plastid 40.53 39.35
TraesCS2B01G540300.1 Wheat golgi 37.54 35.76
KRH50677 Soybean mitochondrion 12.96 35.45
TraesCS1B01G382900.1 Wheat plasma membrane, vacuole 30.23 33.21
TraesCS7B01G341900.1 Wheat golgi, mitochondrion 37.54 33.04
TraesCS6B01G160200.1 Wheat mitochondrion 34.88 31.63
Protein Annotations
EnsemblPlants:TraesCS7B01G485000.1EnsemblPlantsGene:TraesCS7B01G485000GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0045492InterPro:IRX15/IRX15L/IGXMInterPro:Polysacc_synth_domPANTHER:PTHR31444PANTHER:PTHR31444:SF2
PFAM:PF04669SEG:segTIGRFAMs:TIGR01627TMHMM:TMhelixMapMan:21.2.2.2.3:
Description
No Description!
Coordinates
chr7B:-:741718360..741719265
Molecular Weight (calculated)
32403.9 Da
IEP (calculated)
7.631
GRAVY (calculated)
0.053
Length
301 amino acids
Sequence
(BLAST)
001: MSMSSPVHAR KALHLVAMKA KLQSFLGLRL LVVAALAAFL LLFSARTLFS TSSPGSAASS HLRLTGDGSC SKLPAPVADA LVHYATSNST PQQTSAEIGV
101: SLRVLQRRSP CNFLVFGLGL DSPMWAALNH GGRTVFLEED ASWIASVRAK HPGLESYHVA YDTRLTDADE LMSLRDHPGC TAQPDLAAAA EASCRLALRG
201: LPAAFHEVEW DLVMVDAPTG WVPEAPGRMG AIYTAGMVAR ARRPGDGATD VFVHDVDRTV EDRFSKAFLC DAYLAEQVGR IRHFVIPSHR EKPGTPFCPL
301: S
Best Arabidopsis Sequence Match ( AT4G09990.1 )
(BLAST)
001: MRNKSQSFIS SKLIFICCSI LVLFILFLKR ASFSSNSTAT IRDEYHQKSK CPSTPQQCTK LPTSLSDALV HYVTSEITPQ QTFDEVSVSK RVLDKKSPCN
101: FLVFGLGHDS LMWASLNHGG RTLFLEEDEA WIETVTKKFP NLESYHVVYD TKVKDSNKLM ELKRTEDCKA VSDPRDSKCA LSLKGFPADV YETQWDVIMV
201: DAPTGYHDEA PGRMSAIYTA GLLARNRYDG GETDVFVHDI NRPVEDEFSV AFLCGGYMKE QQGRLRHFNI PSHRASFGTP FCPADISRRF
Arabidopsis Description
GXM2Glucuronoxylan 4-O-methyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0F7]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.