CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6
peroxisome 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50678	Soybean	cytosol	46.36	71.83
KRH06044	Soybean	endoplasmic reticulum, golgi, vacuole	47.27	18.57
GSMUA_Achr8P29140_001	Banana	endoplasmic reticulum, golgi	43.64	17.2
Bra030789.1-P	Field mustard	endoplasmic reticulum, golgi	41.82	16.37
CDY20685	Canola	endoplasmic reticulum, golgi, plasma membrane	41.82	16.37
CDY31075	Canola	endoplasmic reticulum, golgi, plasma membrane	40.91	16.01
Solyc01g103360.2.1	Tomato	plasma membrane	40.0	16.0
AT1G09610.1	Thale cress	endoplasmic reticulum, golgi	40.91	15.96
PGSC0003DMT400064018	Potato	plasma membrane	40.0	15.94
VIT_12s0035g01340.t01	Wine grape	golgi	40.0	15.49
VIT_12s0035g01170.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	39.09	14.83
KRH64803	Soybean	golgi, plasma membrane	40.91	14.71
TraesCS5D01G319700.1	Wheat	mitochondrion	38.18	14.09
TraesCS5A01G313000.1	Wheat	mitochondrion	38.18	14.05
HORVU5Hr1G080580.1	Barley	endoplasmic reticulum, mitochondrion, plastid	38.18	14.0
TraesCS5B01G313900.1	Wheat	golgi, unclear	37.27	13.67
TraesCS7A01G560100.1	Wheat	mitochondrion, plastid	36.36	13.24
TraesCS7D01G549800.1	Wheat	mitochondrion, plastid	36.36	13.07
TraesCS7B01G485000.1	Wheat	mitochondrion, plastid	35.45	12.96
Os12t0204500-01	Rice	endoplasmic reticulum, golgi	34.55	12.88
EES16857	Sorghum	mitochondrion	35.45	12.87
KRH58773	Soybean	endoplasmic reticulum, plasma membrane, vacuole	31.82	12.64
KRH42675	Soybean	endoplasmic reticulum	31.82	12.24
KRH31488	Soybean	endoplasmic reticulum, golgi	30.0	11.62
TraesCS4B01G089200.1	Wheat	mitochondrion	33.64	11.46
TraesCS4A01G227100.1	Wheat	mitochondrion	33.64	11.42
KRG94533	Soybean	golgi, mitochondrion	31.82	11.36
TraesCS4D01G086700.1	Wheat	mitochondrion	33.64	11.35
HORVU7Hr1G120340.1	Barley	plastid	36.36	11.2
KRH06938	Soybean	endoplasmic reticulum, plasma membrane, vacuole	30.0	11.15
Os11t0242600-00	Rice	mitochondrion	30.91	10.76
HORVU4Hr1G015310.3	Barley	endoplasmic reticulum, plastid	34.55	10.73
KRG97408	Soybean	plastid	30.91	10.62
KRH50341	Soybean	golgi, plastid	28.18	9.97
KRH77040	Soybean	mitochondrion	25.45	9.21
KRH57814	Soybean	mitochondrion	26.36	9.18
EES08266	Sorghum	mitochondrion	27.27	9.15
GSMUA_Achr10P...	Banana	endoplasmic reticulum, golgi	20.91	9.13
KRH28432	Soybean	mitochondrion	25.45	9.09
KRH70689	Soybean	plastid	26.36	8.98
KRH04549	Soybean	plastid	25.45	8.89
KRH57238	Soybean	golgi	20.0	7.53
KRH63768	Soybean	plastid	17.27	6.51
KRH54181	Soybean	plastid	17.27	6.25
KRH03967	Soybean	vacuole	18.18	6.04
Zm00001d003239_P001	Maize	cytosol	1.82	1.2

Protein Annotations

EMBL:ACUP02004709	EnsemblPlants:KRH50677	EnsemblPlantsGene:GLYMA_07G236400	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0045492	InterPro:IRX15/IRX15L/IGXM	InterPro:Polysacc_synth_dom	PANTHER:PTHR31444
PANTHER:PTHR31444:SF18	PFAM:PF04669	ProteinID:KRH50677	ProteinID:KRH50677.1	UniParc:UPI00029507A9	UniProt:K7L3H9
MapMan:35.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:41817004..41817411

Molecular Weight (calculated)

13068.1 Da

IEP (calculated)

9.700

GRAVY (calculated)

-0.196

Length

110 amino acids

Sequence
(BLAST)

001: MILRVISNFL SQCHRVSLKE FNTGRCWKKQ LNIAKDARRV DVLCYRIYLS YRLVDVTARV LEKKSPCNFL VFGLGHDGLM WNALNHGGRT IFLEEEESWI
101: QQMRRFPMME

Best Arabidopsis Sequence Match ( AT1G09610.1 )
(BLAST)

001: MRPKANQNHK LKVLLVFLLA TLILIFIVRS TLTSSQEHQT PQETRSTRCS GACNKLPRSL AQALIHYSTS VITPQQTLKE IAVSSRVLGK KSPCNFLVFG
101: LGHDSLMWSS LNYGGRTVFL EEDEAWIKQI KRRFPMLESY HVTYDSKVNQ ADNLIEVGKG PECTAIGDPR YSMCQLALKG LPAEIYETGW DLIMVDAPTG
201: YYDEAPGRMT AIYTAGMMAR NRKQGGETDV FVHDVNREIE DKFSKAFLCE GYMKKQEGRL RHFIIPSYRD GSESESNRPF CP

Arabidopsis Description

GXM1GXM3 [Source:UniProtKB/TrEMBL;Acc:A0A178W7U8]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.