CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 3
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 6
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH03967	Soybean	vacuole	89.38	78.85
KRH63768	Soybean	plastid	65.07	65.07
KRH54181	Soybean	plastid	67.47	64.8
Solyc11g020540.1.1	Tomato	cytosol	13.36	58.21
Bra013845.1-P	Field mustard	cytosol	32.53	53.07
PGSC0003DMT400039556	Potato	golgi	44.18	47.96
GSMUA_Achr9P01440_001	Banana	golgi	42.81	47.71
Solyc11g020470.1.1	Tomato	cytosol	24.32	47.02
CDY03407	Canola	plastid	48.97	45.98
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular, golgi	40.07	45.53
AT4G24910.1	Thale cress	plastid	47.95	44.44
CDY34323	Canola	plastid	46.58	44.01
CDX92660	Canola	plastid	46.23	43.27
Bra019203.1-P	Field mustard	plastid	45.89	42.95
Solyc03g110890.1.1	Tomato	plasma membrane, vacuole	43.15	41.86
Zm00001d001763_P001	Maize	plasma membrane	34.93	36.3
TraesCS1D01G370900.1	Wheat	extracellular, plasma membrane	32.19	34.94
OQU82596	Sorghum	plastid	34.59	34.12
TraesCS1A01G365400.1	Wheat	golgi	32.19	34.06
TraesCS1B01G382900.1	Wheat	plasma membrane, vacuole	31.51	33.58
KRH06044	Soybean	endoplasmic reticulum, golgi, vacuole	28.42	29.64
KRH58773	Soybean	endoplasmic reticulum, plasma membrane, vacuole	28.08	29.6
KRH64803	Soybean	golgi, plasma membrane	30.82	29.41
KRH04549	Soybean	plastid	31.16	28.89
KRH31488	Soybean	endoplasmic reticulum, golgi	28.08	28.87
KRH06938	Soybean	endoplasmic reticulum, plasma membrane, vacuole	28.77	28.38
KRH50678	Soybean	cytosol	6.85	28.17
KRH57814	Soybean	mitochondrion	30.14	27.85
KRH42675	Soybean	endoplasmic reticulum	27.05	27.62
KRH50341	Soybean	golgi, plastid	29.11	27.33
KRH77040	Soybean	mitochondrion	28.42	27.3
KRG94533	Soybean	golgi, mitochondrion	28.42	26.95
KRH28432	Soybean	mitochondrion	27.74	26.3
KRG97408	Soybean	plastid	28.42	25.94
KRH70689	Soybean	plastid	28.08	25.39
KRH50677	Soybean	mitochondrion	7.53	20.0
Os11t0488500-01	Rice	cytosol, nucleus	12.67	11.38

Protein Annotations

EMBL:ACUP02002822	EnsemblPlants:KRH57238	EnsemblPlantsGene:GLYMA_05G048600	EntrezGene:100792528	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0045492	InterPro:IRX15/IRX15L/IGXM	InterPro:Polysacc_synth_dom
PANTHER:PTHR31444	PANTHER:PTHR31444:SF7	PFAM:PF04669	ProteinID:KRH57238	ProteinID:KRH57238.1	SEG:seg
TIGRFAMs:TIGR01627	TMHMM:TMhelix	UniParc:UPI000233A105	UniProt:I1K0B9	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr5:-:4333127..4334493

Molecular Weight (calculated)

32471.6 Da

IEP (calculated)

9.951

GRAVY (calculated)

-0.189

Length

292 amino acids

Sequence
(BLAST)

001: MKGMNLTKKK LIPILVLILS VISILRLLSL NVKTLPFSAR ISVLSPAPQH NCSQPLSTCN KTASHAPESS DQPINTPNIT TTLTEKEFKV LSDLIALKSP
101: CNLLIFGFQP QYLILSSMNA AGSTIFLDED PDKISKVRKI SNNTQIYKLE YNMPAKAGYK LLKNARLNPA TCVPNPRFLQ KSKCKLALKN LPSQVYEKKW
201: DVMVVDGPNG DSPESPGRMG SIYTASVLAR SGNTSDVVVH DVDRMIEKWF SWEFLCDGNL LYSKGKLWHF RIKVHSNSTR FCPAEEGSTI GK

Best Arabidopsis Sequence Match ( AT4G24910.1 )
(BLAST)

001: MPPQFHQSSL SILNPLLRFS PPSSPDNPKH QRLSTIKMPK FTVRKLIPLL IFVLSSLSVL RLLRISYKSS SKSQSSSSTT FRLSPADSSQ QLRANEGPTA
101: LMEKELKLLS DTVTRRSPCN ILVFGFAPQY LMLSSINTRG ITVILEDEPA KIMIPKAEVN PNNTRIYSLK YHQMEVRNAY NLLQHARANP ACAPNMNNQH
201: QGSSDCKLEL RDLPQQVHNT KWDVIVVDGP RGDDLETPGR MGSIYTAAVL ARKGSSNSTT DVFVHDVHRT AEKWLSWEFL CQENLVSAKG TFWKFRIKRQ
301: SNASRFCSPE TVIIR

Arabidopsis Description

Glucuronoxylan 4-O-methyltransferase-like protein (DUF579) [Source:UniProtKB/TrEMBL;Acc:Q9SW35]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.