Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- endoplasmic reticulum 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY34323 | Canola | plastid | 91.32 | 91.91 |
| CDX92660 | Canola | plastid | 81.03 | 80.77 |
| AT4G24910.1 | Thale cress | plastid | 79.1 | 78.1 |
| Solyc11g020540.1.1 | Tomato | cytosol | 11.25 | 52.24 |
| KRH57238 | Soybean | golgi | 45.98 | 48.97 |
| KRH63768 | Soybean | plastid | 44.37 | 47.26 |
| KRH54181 | Soybean | plastid | 45.34 | 46.38 |
| KRH03967 | Soybean | vacuole | 47.27 | 44.41 |
| GSMUA_Achr9P01440_001 | Banana | golgi | 36.66 | 43.51 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, extracellular, golgi | 35.37 | 42.8 |
| PGSC0003DMT400039556 | Potato | golgi | 36.98 | 42.75 |
| Solyc11g020470.1.1 | Tomato | cytosol | 19.94 | 41.06 |
| Solyc03g110890.1.1 | Tomato | plasma membrane, vacuole | 38.26 | 39.53 |
| Zm00001d001763_P001 | Maize | plasma membrane | 33.44 | 37.01 |
| OQU82596 | Sorghum | plastid | 34.08 | 35.81 |
| TraesCS1D01G370900.1 | Wheat | extracellular, plasma membrane | 29.58 | 34.2 |
| TraesCS1A01G365400.1 | Wheat | golgi | 29.9 | 33.7 |
| TraesCS1B01G382900.1 | Wheat | plasma membrane, vacuole | 29.58 | 33.58 |
| CDY20685 | Canola | endoplasmic reticulum, golgi, plasma membrane | 28.62 | 31.67 |
| CDY31075 | Canola | endoplasmic reticulum, golgi, plasma membrane | 28.62 | 31.67 |
| CDY48797 | Canola | golgi, plasma membrane | 28.62 | 29.97 |
| CDY07428 | Canola | endoplasmic reticulum, golgi | 27.97 | 29.9 |
| CDY28894 | Canola | endoplasmic reticulum, golgi | 27.65 | 29.55 |
| CDY12639 | Canola | endoplasmic reticulum, golgi | 27.33 | 29.51 |
| CDY62313 | Canola | plastid | 30.23 | 29.38 |
| CDY37228 | Canola | plastid | 30.23 | 29.1 |
| CDY15292 | Canola | golgi | 27.33 | 28.72 |
| CDX93751 | Canola | golgi | 27.33 | 28.72 |
| CDY13145 | Canola | plastid | 30.23 | 28.66 |
| CDY51186 | Canola | endoplasmic reticulum, plasma membrane | 27.01 | 28.47 |
| CDX89660 | Canola | plastid | 30.23 | 28.4 |
| CDY27638 | Canola | endoplasmic reticulum | 26.37 | 28.37 |
| CDX84898 | Canola | endoplasmic reticulum | 26.37 | 28.37 |
| CDX81329 | Canola | plastid | 27.97 | 28.25 |
| CDX96332 | Canola | endoplasmic reticulum, extracellular | 26.69 | 28.04 |
| CDY12819 | Canola | golgi, mitochondrion, plasma membrane, plastid | 27.97 | 27.62 |
| CDY01429 | Canola | golgi, mitochondrion, plasma membrane, plastid | 27.65 | 27.3 |
| CDY30600 | Canola | endoplasmic reticulum, golgi | 28.3 | 27.16 |
| CDY17753 | Canola | endoplasmic reticulum, golgi | 28.3 | 27.16 |
| CDY37946 | Canola | extracellular | 22.83 | 26.79 |
| CDX72815 | Canola | endoplasmic reticulum, extracellular | 25.72 | 26.58 |
| Os11t0488500-01 | Rice | cytosol, nucleus | 12.86 | 12.31 |
Protein Annotations
| EnsemblPlants:CDY03407 | EnsemblPlantsGene:GSBRNA2T00116053001 | GO:A0A078EQQ6 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045492 | InterPro:IRX15/IRX15L/IGXM | InterPro:Polysacc_synth_dom | PANTHER:PTHR31444 |
| PANTHER:PTHR31444:SF7 | PFAM:PF04669 | ProteinID:CDY03407 | ProteinID:CDY03407.1 | SEG:seg | TIGRFAMs:TIGR01627 |
| UniParc:UPI0004EDB9D0 | MapMan:35.1 | : | : | : | : |
Description
BnaC01g16750D
Coordinates
chrLK031943:+:281602..282537
Molecular Weight (calculated)
34905.9 Da
IEP (calculated)
10.076
GRAVY (calculated)
-0.353
Length
311 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPQLHQSSL HILNALLRFS PPSSPDNPKH QKESKFTMPK LTVRKLIPLL IFVLSSLSVL RLLRISLKSS SPVSRPVSST TFRLSPSESS QQITANASQS
101: ALTEKELKLL SDTIALKSLC NVLVFGFAHQ YLMLSSLNTR GITVIIDDEP SKITTPNNTR VYSLKYDQME VKNTYKLLRH ARSNPACAPN MNHLHQDSSD
201: CKLKLKDLPQ EVHNTKWDVI VVDGPRGDDL EAPGRMGSIY TAAVLARRGS SNSTTDVLVH DVQRTAEKWF SWEFLCQENQ VSAKGNLWKF RINGQSNTSR
301: FCSPETSLVR Y
101: ALTEKELKLL SDTIALKSLC NVLVFGFAHQ YLMLSSLNTR GITVIIDDEP SKITTPNNTR VYSLKYDQME VKNTYKLLRH ARSNPACAPN MNHLHQDSSD
201: CKLKLKDLPQ EVHNTKWDVI VVDGPRGDDL EAPGRMGSIY TAAVLARRGS SNSTTDVLVH DVQRTAEKWF SWEFLCQENQ VSAKGNLWKF RINGQSNTSR
301: FCSPETSLVR Y
001: MPPQFHQSSL SILNPLLRFS PPSSPDNPKH QRLSTIKMPK FTVRKLIPLL IFVLSSLSVL RLLRISYKSS SKSQSSSSTT FRLSPADSSQ QLRANEGPTA
101: LMEKELKLLS DTVTRRSPCN ILVFGFAPQY LMLSSINTRG ITVILEDEPA KIMIPKAEVN PNNTRIYSLK YHQMEVRNAY NLLQHARANP ACAPNMNNQH
201: QGSSDCKLEL RDLPQQVHNT KWDVIVVDGP RGDDLETPGR MGSIYTAAVL ARKGSSNSTT DVFVHDVHRT AEKWLSWEFL CQENLVSAKG TFWKFRIKRQ
301: SNASRFCSPE TVIIR
101: LMEKELKLLS DTVTRRSPCN ILVFGFAPQY LMLSSINTRG ITVILEDEPA KIMIPKAEVN PNNTRIYSLK YHQMEVRNAY NLLQHARANP ACAPNMNNQH
201: QGSSDCKLEL RDLPQQVHNT KWDVIVVDGP RGDDLETPGR MGSIYTAAVL ARKGSSNSTT DVFVHDVHRT AEKWLSWEFL CQENLVSAKG TFWKFRIKRQ
301: SNASRFCSPE TVIIR
Arabidopsis Description
Glucuronoxylan 4-O-methyltransferase-like protein (DUF579) [Source:UniProtKB/TrEMBL;Acc:Q9SW35]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.