Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:
  • plastid 2
  • mitochondrion 2
  • endoplasmic reticulum 3
  • extracellular 2
  • vacuole 2
  • plasma membrane 2
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
WoLF PSORT:mitochondrion
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY30600 Canola endoplasmic reticulum, golgi 99.38 99.38
Bra036059.1-P Field mustard endoplasmic reticulum, golgi, plastid 99.07 99.07
AT3G50220.1 Thale cress endoplasmic reticulum, golgi 92.59 93.17
CDX81329 Canola plastid 79.32 83.44
CDY12819 Canola golgi, mitochondrion, plasma membrane, plastid 80.25 82.54
CDY01429 Canola golgi, mitochondrion, plasma membrane, plastid 79.94 82.22
KRH77040 Soybean mitochondrion 64.2 68.42
KRH28432 Soybean mitochondrion 64.2 67.53
VIT_07s0031g00110.t01 Wine grape golgi 62.96 65.81
KRH04549 Soybean plastid 62.35 64.13
KRH57814 Soybean mitochondrion 62.04 63.61
PGSC0003DMT400065494 Potato golgi, plasma membrane, plastid 58.33 62.58
PGSC0003DMT400064322 Potato plastid 59.26 62.34
Solyc02g093090.1.1 Tomato extracellular, nucleus 58.02 61.04
HORVU0Hr1G015370.1 Barley cytosol, extracellular 35.8 48.54
GSMUA_Achr9P25260_001 Banana golgi 47.84 47.26
GSMUA_Achr10P... Banana extracellular, plasma membrane, plastid 41.98 47.22
GSMUA_Achr8P03360_001 Banana golgi 47.22 46.65
GSMUA_Achr6P29610_001 Banana endoplasmic reticulum, golgi, plastid 46.3 46.01
Zm00001d014532_P001 Maize plasma membrane 44.14 44.55
Zm00001d015307_P001 Maize golgi, mitochondrion, plastid 44.14 44.27
OQU84413 Sorghum golgi, mitochondrion 43.21 43.75
EER88850 Sorghum plastid 44.44 43.37
TraesCS6A01G131900.1 Wheat mitochondrion 43.52 42.99
CDY13145 Canola plastid 43.52 42.99
CDY62313 Canola plastid 42.28 42.81
CDX89660 Canola plastid 43.52 42.6
HORVU2Hr1G113560.1 Barley golgi, plasma membrane 39.51 42.52
Os06t0687600-00 Rice golgi 43.83 42.26
TraesCS6D01G121700.1 Wheat mitochondrion 42.59 42.2
TraesCS2A01G512400.1 Wheat golgi 41.05 42.09
TraesCS2D01G513800.1 Wheat golgi, plastid 41.05 42.09
CDY37228 Canola plastid 41.67 41.8
TraesCS2B01G540300.1 Wheat golgi 40.74 41.77
TraesCS7D01G432300.1 Wheat golgi, mitochondrion 43.52 41.59
TraesCS7B01G341900.1 Wheat golgi, mitochondrion 43.83 41.52
TraesCS7A01G443100.1 Wheat golgi, mitochondrion 43.52 41.35
Zm00001d002066_P001 Maize plasma membrane 42.59 41.19
KXG27192 Sorghum golgi, mitochondrion, plastid 41.36 40.98
TraesCS6B01G160200.1 Wheat mitochondrion 41.98 40.96
Os04t0649900-01 Rice mitochondrion 38.89 39.62
HORVU7Hr1G100750.3 Barley endoplasmic reticulum 41.36 39.53
Os02t0158500-00 Rice plastid 41.67 34.44
CDX96332 Canola endoplasmic reticulum, extracellular 29.94 32.77
CDY20685 Canola endoplasmic reticulum, golgi, plasma membrane 28.09 32.38
CDY31075 Canola endoplasmic reticulum, golgi, plasma membrane 27.78 32.03
CDY12639 Canola endoplasmic reticulum, golgi 28.09 31.6
CDY28894 Canola endoplasmic reticulum, golgi 28.09 31.27
CDY07428 Canola endoplasmic reticulum, golgi 27.78 30.93
CDX72815 Canola endoplasmic reticulum, extracellular 28.7 30.9
CDY27638 Canola endoplasmic reticulum 27.47 30.8
CDX84898 Canola endoplasmic reticulum 27.47 30.8
CDY48797 Canola golgi, plasma membrane 27.78 30.3
CDY51186 Canola endoplasmic reticulum, plasma membrane 27.47 30.17
CDY15292 Canola golgi 27.47 30.07
CDX93751 Canola golgi 27.47 30.07
CDY37946 Canola extracellular 23.46 28.68
CDY03407 Canola plastid 27.16 28.3
CDY34323 Canola plastid 26.85 28.16
CDX92660 Canola plastid 26.54 27.56
Protein Annotations
MapMan:35.1GO:A0A078FZI5UniProt:A0A078FZI5EnsemblPlants:CDY17753ProteinID:CDY17753ProteinID:CDY17753.1
GO:GO:0005575GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0045492EnsemblPlantsGene:GSBRNA2T00001997001InterPro:IRX15/IRX15L/IGXMPFAM:PF04669
PANTHER:PTHR31444PANTHER:PTHR31444:SF8InterPro:Polysacc_synth_domTIGRFAMs:TIGR01627TMHMM:TMhelixUniParc:UPI0004EE6D16
SEG:seg:::::
Description
BnaC08g21610DBnaC08g21610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FZI5]
Coordinates
chrLK032077:-:356399..357433
Molecular Weight (calculated)
36082.9 Da
IEP (calculated)
7.084
GRAVY (calculated)
-0.175
Length
324 amino acids
Sequence
(BLAST)
001: MKNGSGNTNT KLILLHPYIQ KQSSTTRLWL LAFVSFFTII FLLTLLYTRD TIIPSKNTSV AAAVAAVVTS AAGVSPSPTT ITNSNLPTTT INALLHYASR
101: SNDSFHMSYG EMKSISDVLR RCAPPCNLLV FGLTHETLLW KALNHNGRTV FVEENRYYAA YFEEIHPEID VFDVQYTTKA HEAGELVAAA KEAAGNECRP
201: VQNLLFSDCK LGLNDLPNHV YDVDWDVIFV DGPRGDANEG PGRMSSIFTA AVLARSKKGG SPKTHVFVHD YYRDVERLCG DEFLCRENLV ESNELLAHYV
301: LDKMDKNSTR FCSDRKKRSV SSLS
Best Arabidopsis Sequence Match ( AT3G50220.1 )
(BLAST)
001: MKNGSGNTNT KLILLHPYIQ KQTSTTRLWL LAFVSFFTIV FLLTLLYTRD TIPSKNTSVA AAVAAVVTGG STPSASSPIS NSNLPTSAIN ALLHYASRSN
101: DSFHMSYGEM KSISDVLRRC APPCNLLVFG LTHETLLWKS LNHNGRTVFI EENRYYAAYF EEIHPEIDVF DVQYTTKAHE AGELVTAAKE AAGNECRPVQ
201: NLLFSDCKLG LNDLPNHVYD VDWDVIFVDG PRGDAHEGPG RMSSIFTAAV LARSKKGGTP KTHVFVHDYY RDVERLCGDE FLCRENLVES NDLLAHYVLD
301: KMDKNSTKFC NGRKKRSVSS LS
Arabidopsis Description
IRX15Protein IRREGULAR XYLEM 15 [Source:UniProtKB/Swiss-Prot;Acc:Q9SNE5]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.