Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 1
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 1
- golgi 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37228 | Canola | plastid | 92.5 | 91.64 |
| CDY13145 | Canola | plastid | 84.38 | 82.32 |
| CDX89660 | Canola | plastid | 84.38 | 81.57 |
| AT2G15440.1 | Thale cress | plastid | 77.5 | 75.38 |
| KRH50341 | Soybean | golgi, plastid | 50.62 | 52.09 |
| KRH70689 | Soybean | plastid | 48.75 | 48.3 |
| HORVU0Hr1G015370.1 | Barley | cytosol, extracellular | 35.0 | 46.86 |
| CDY12819 | Canola | golgi, mitochondrion, plasma membrane, plastid | 45.62 | 46.35 |
| CDY01429 | Canola | golgi, mitochondrion, plasma membrane, plastid | 45.31 | 46.03 |
| PGSC0003DMT400066571 | Potato | endoplasmic reticulum, golgi, mitochondrion, plastid | 45.0 | 45.86 |
| CDX81329 | Canola | plastid | 42.81 | 44.48 |
| Solyc01g107800.2.1 | Tomato | endoplasmic reticulum, golgi, mitochondrion, plastid | 43.44 | 44.27 |
| CDY17753 | Canola | endoplasmic reticulum, golgi | 42.81 | 42.28 |
| CDY30600 | Canola | endoplasmic reticulum, golgi | 42.5 | 41.98 |
| HORVU2Hr1G113560.1 | Barley | golgi, plasma membrane | 39.38 | 41.86 |
| GSMUA_Achr9P25260_001 | Banana | golgi | 42.81 | 41.77 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane, plastid | 35.94 | 39.93 |
| GSMUA_Achr8P03360_001 | Banana | golgi | 40.62 | 39.63 |
| Os04t0649900-01 | Rice | mitochondrion | 39.38 | 39.62 |
| GSMUA_Achr6P29610_001 | Banana | endoplasmic reticulum, golgi, plastid | 40.31 | 39.57 |
| TraesCS2B01G540300.1 | Wheat | golgi | 39.06 | 39.56 |
| TraesCS2D01G513800.1 | Wheat | golgi, plastid | 39.06 | 39.56 |
| TraesCS2A01G512400.1 | Wheat | golgi | 38.75 | 39.24 |
| KXG27192 | Sorghum | golgi, mitochondrion, plastid | 39.69 | 38.84 |
| Zm00001d014532_P001 | Maize | plasma membrane | 38.75 | 38.63 |
| EER88850 | Sorghum | plastid | 39.38 | 37.95 |
| TraesCS6D01G121700.1 | Wheat | mitochondrion | 38.75 | 37.92 |
| OQU84413 | Sorghum | golgi, mitochondrion | 37.81 | 37.81 |
| TraesCS6A01G131900.1 | Wheat | mitochondrion | 38.75 | 37.8 |
| Zm00001d015307_P001 | Maize | golgi, mitochondrion, plastid | 37.5 | 37.15 |
| TraesCS6B01G160200.1 | Wheat | mitochondrion | 38.44 | 37.05 |
| Zm00001d002066_P001 | Maize | plasma membrane | 38.75 | 37.01 |
| TraesCS7A01G443100.1 | Wheat | golgi, mitochondrion | 39.06 | 36.66 |
| TraesCS7D01G432300.1 | Wheat | golgi, mitochondrion | 38.75 | 36.58 |
| TraesCS7B01G341900.1 | Wheat | golgi, mitochondrion | 39.06 | 36.55 |
| Os06t0687600-00 | Rice | golgi | 38.12 | 36.31 |
| HORVU7Hr1G100750.3 | Barley | endoplasmic reticulum | 37.19 | 35.1 |
| CDX96332 | Canola | endoplasmic reticulum, extracellular | 30.94 | 33.45 |
| CDY20685 | Canola | endoplasmic reticulum, golgi, plasma membrane | 28.75 | 32.74 |
| CDY31075 | Canola | endoplasmic reticulum, golgi, plasma membrane | 28.44 | 32.38 |
| CDY12639 | Canola | endoplasmic reticulum, golgi | 28.12 | 31.25 |
| CDX72815 | Canola | endoplasmic reticulum, extracellular | 29.06 | 30.9 |
| CDY28894 | Canola | endoplasmic reticulum, golgi | 27.81 | 30.58 |
| CDY51186 | Canola | endoplasmic reticulum, plasma membrane | 28.12 | 30.51 |
| Os02t0158500-00 | Rice | plastid | 37.19 | 30.36 |
| CDY48797 | Canola | golgi, plasma membrane | 28.12 | 30.3 |
| CDY07428 | Canola | endoplasmic reticulum, golgi | 27.5 | 30.24 |
| CDY03407 | Canola | plastid | 29.38 | 30.23 |
| CDY15292 | Canola | golgi | 27.5 | 29.73 |
| CDX93751 | Canola | golgi | 27.5 | 29.73 |
| CDY34323 | Canola | plastid | 28.44 | 29.45 |
| CDX92660 | Canola | plastid | 27.81 | 28.53 |
| CDY37946 | Canola | extracellular | 23.12 | 27.92 |
| CDY27638 | Canola | endoplasmic reticulum | 24.38 | 26.99 |
| CDX84898 | Canola | endoplasmic reticulum | 24.38 | 26.99 |
Protein Annotations
| MapMan:35.1 | GO:A0A078JCH4 | UniProt:A0A078JCH4 | EnsemblPlants:CDY62313 | ProteinID:CDY62313 | ProteinID:CDY62313.1 |
| GO:GO:0005575 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0045492 | EnsemblPlantsGene:GSBRNA2T00036159001 | InterPro:IRX15/IRX15L/IGXM | PFAM:PF04669 |
| PANTHER:PTHR31444 | PANTHER:PTHR31444:SF0 | InterPro:Polysacc_synth_dom | TIGRFAMs:TIGR01627 | TMHMM:TMhelix | UniParc:UPI0004EEBB1F |
| SEG:seg | : | : | : | : | : |
Description
BnaCnng39920DBnaCnng39920D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JCH4]
Coordinates
chrLK034129:-:15241..16203
Molecular Weight (calculated)
35200.8 Da
IEP (calculated)
7.265
GRAVY (calculated)
-0.095
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSNKNTNLI LFHHHNTASA VATVNHHRLL LLFIFILSFF TLVFSFFLFS SSLHSTTPTS NSLSSSSSSP SSLSPPILAA LLHYTSSTPP NTSMSLSELS
101: TISTVINSKA PTCNLLVFGL SHESLLWRSV NLKGRTVFVD ENPYAVSRFE QSNPGAEAYD VVFPTKVPQA GKLLRYYKTR SECRPVQNLL FSDCKLAIND
201: LPNFVYEIDW DVILIDGPSG YAGDSPGRMA PIFTSAVLAK SKDSGKKTKT TDVFVREFGR KLERVYSDEF LCEENLIEVF GEIGHFVLAG EKGGKQGNGF
301: CRNSTKLSEP FTPVSGGDED
101: TISTVINSKA PTCNLLVFGL SHESLLWRSV NLKGRTVFVD ENPYAVSRFE QSNPGAEAYD VVFPTKVPQA GKLLRYYKTR SECRPVQNLL FSDCKLAIND
201: LPNFVYEIDW DVILIDGPSG YAGDSPGRMA PIFTSAVLAK SKDSGKKTKT TDVFVREFGR KLERVYSDEF LCEENLIEVF GEIGHFVLAG EKGGKQGNGF
301: CRNSTKLSEP FTPVSGGDED
001: MKSNTNTNLI LFHHHSPLTS KSPSAVAAAN HHRFLFIFFL SFFTLLFSFS LFSSSIHSTT SSHSLSSSPS SSSLPPPVLA ALLHYTSSSP PNTSMSFLEL
101: STISNIIHSH GPACNLLIFG LTHESLLWRS INFQGRTVFV DESPYSVSKF EQSNPGVEAY EVVYSTKVSQ AKKLLGYYKT RPECRPVQNL LFSDCKLGIN
201: DLPNFVYEID WDVILIDGPR GYASDSPGRM APIFTSAVLA KSKDFGTKTK KTDVLVHEFG RKIERVYSEE FLCEENLIEV VGDLGHFVVA AAEERESYGD
301: GFCRNSTRLS ESFTAVSGGD EEKVGVDDE
101: STISNIIHSH GPACNLLIFG LTHESLLWRS INFQGRTVFV DESPYSVSKF EQSNPGVEAY EVVYSTKVSQ AKKLLGYYKT RPECRPVQNL LFSDCKLGIN
201: DLPNFVYEID WDVILIDGPR GYASDSPGRM APIFTSAVLA KSKDFGTKTK KTDVLVHEFG RKIERVYSEE FLCEENLIEV VGDLGHFVVA AAEERESYGD
301: GFCRNSTRLS ESFTAVSGGD EEKVGVDDE
Arabidopsis Description
At2g15440 [Source:UniProtKB/TrEMBL;Acc:Q9SJN8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.