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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • plastid 2
  • mitochondrion 1
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 1
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:endoplasmic reticulum, golgi, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra013107.1-P Field mustard plastid 99.09 99.09
CDX89660 Canola plastid 97.87 96.98
CDY62313 Canola plastid 82.32 84.38
CDY37228 Canola plastid 82.01 83.28
AT2G15440.1 Thale cress plastid 80.79 80.55
KRH50341 Soybean golgi, plastid 52.44 55.31
KRH70689 Soybean plastid 51.22 52.01
PGSC0003DMT400066571 Potato endoplasmic reticulum, golgi, mitochondrion, plastid 47.26 49.36
Solyc01g107800.2.1 Tomato endoplasmic reticulum, golgi, mitochondrion, plastid 45.73 47.77
CDY12819 Canola golgi, mitochondrion, plasma membrane, plastid 45.12 46.98
CDY01429 Canola golgi, mitochondrion, plasma membrane, plastid 44.82 46.67
HORVU0Hr1G015370.1 Barley cytosol, extracellular 33.54 46.03
CDX81329 Canola plastid 42.38 45.13
GSMUA_Achr9P25260_001 Banana golgi 43.6 43.6
HORVU2Hr1G113560.1 Barley golgi, plasma membrane 39.94 43.52
CDY17753 Canola endoplasmic reticulum, golgi 42.99 43.52
CDY30600 Canola endoplasmic reticulum, golgi 42.68 43.21
GSMUA_Achr10P... Banana extracellular, plasma membrane, plastid 37.5 42.71
GSMUA_Achr6P29610_001 Banana endoplasmic reticulum, golgi, plastid 41.46 41.72
GSMUA_Achr8P03360_001 Banana golgi 41.46 41.46
TraesCS2D01G513800.1 Wheat golgi, plastid 39.94 41.46
TraesCS2B01G540300.1 Wheat golgi 39.94 41.46
TraesCS2A01G512400.1 Wheat golgi 39.63 41.14
Os04t0649900-01 Rice mitochondrion 39.63 40.88
KXG27192 Sorghum golgi, mitochondrion, plastid 39.94 40.06
Zm00001d014532_P001 Maize plasma membrane 39.02 39.88
OQU84413 Sorghum golgi, mitochondrion 38.41 39.38
EER88850 Sorghum plastid 39.63 39.16
TraesCS6D01G121700.1 Wheat mitochondrion 38.72 38.84
TraesCS6A01G131900.1 Wheat mitochondrion 38.72 38.72
Zm00001d002066_P001 Maize plasma membrane 39.33 38.51
Zm00001d015307_P001 Maize golgi, mitochondrion, plastid 37.8 38.39
TraesCS6B01G160200.1 Wheat mitochondrion 38.41 37.95
TraesCS7D01G432300.1 Wheat golgi, mitochondrion 39.02 37.76
TraesCS7B01G341900.1 Wheat golgi, mitochondrion 39.33 37.72
TraesCS7A01G443100.1 Wheat golgi, mitochondrion 39.02 37.54
Os06t0687600-00 Rice golgi 38.11 37.2
HORVU7Hr1G100750.3 Barley endoplasmic reticulum 36.59 35.4
CDX96332 Canola endoplasmic reticulum, extracellular 31.1 34.46
CDX72815 Canola endoplasmic reticulum, extracellular 29.57 32.23
CDY20685 Canola endoplasmic reticulum, golgi, plasma membrane 27.44 32.03
CDY31075 Canola endoplasmic reticulum, golgi, plasma membrane 27.13 31.67
CDY12639 Canola endoplasmic reticulum, golgi 27.13 30.9
Os02t0158500-00 Rice plastid 36.89 30.87
CDY48797 Canola golgi, plasma membrane 27.74 30.64
CDY28894 Canola endoplasmic reticulum, golgi 27.13 30.58
CDY51186 Canola endoplasmic reticulum, plasma membrane 27.44 30.51
CDY07428 Canola endoplasmic reticulum, golgi 26.83 30.24
CDY03407 Canola plastid 28.66 30.23
CDY37946 Canola extracellular 24.39 30.19
CDY15292 Canola golgi 27.13 30.07
CDX93751 Canola golgi 27.13 30.07
CDY34323 Canola plastid 28.05 29.77
CDX92660 Canola plastid 27.44 28.85
CDX84898 Canola endoplasmic reticulum 25.0 28.37
CDY27638 Canola endoplasmic reticulum 25.0 28.37
Protein Annotations
MapMan:35.1GO:A0A078FFI5UniProt:A0A078FFI5EnsemblPlants:CDY13145ProteinID:CDY13145ProteinID:CDY13145.1
GO:GO:0005575GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0045492EnsemblPlantsGene:GSBRNA2T00071005001InterPro:IRX15/IRX15L/IGXMPFAM:PF04669
PANTHER:PTHR31444PANTHER:PTHR31444:SF0InterPro:Polysacc_synth_domTIGRFAMs:TIGR01627TMHMM:TMhelixUniParc:UPI0004EE0128
SEG:seg:::::
Description
BnaA09g16720DBnaA09g16720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FFI5]
Coordinates
chrLK032031:+:848528..849664
Molecular Weight (calculated)
35774.2 Da
IEP (calculated)
6.434
GRAVY (calculated)
-0.124
Length
328 amino acids
Sequence
(BLAST)
001: MKNNANTNLI LFHHHTPLPS KSASALAAAN HHRLLFIFFL SFFTFLFSLT LFSSSLHSAA TTSHSLSSSS PSSSSLSPPI LAALLHYTSS TPLNTSMSLP
101: ELSAVSTVIN SKGPSCNLLV FGLSHESLLW RSVNLKGRTV FVDENSYAVS KFEQNNPGVE AYDVVYSTKV SQAGKLLGYY KTRPECRPVQ NLLFSDCKLG
201: INDLPNFVYE IEWDVILIDG PRGYAGDSPG RMAPIFTSAV LAKSKDSGKK KTTDVFVHEF GRKLERVYSE EFLCEENLIE VVGELGHFVV AAEKGEKQGN
301: GFCRNSTKLS EPFTPDSGGD AEVGADDD
Best Arabidopsis Sequence Match ( AT2G15440.1 )
(BLAST)
001: MKSNTNTNLI LFHHHSPLTS KSPSAVAAAN HHRFLFIFFL SFFTLLFSFS LFSSSIHSTT SSHSLSSSPS SSSLPPPVLA ALLHYTSSSP PNTSMSFLEL
101: STISNIIHSH GPACNLLIFG LTHESLLWRS INFQGRTVFV DESPYSVSKF EQSNPGVEAY EVVYSTKVSQ AKKLLGYYKT RPECRPVQNL LFSDCKLGIN
201: DLPNFVYEID WDVILIDGPR GYASDSPGRM APIFTSAVLA KSKDFGTKTK KTDVLVHEFG RKIERVYSEE FLCEENLIEV VGDLGHFVVA AAEERESYGD
301: GFCRNSTRLS ESFTAVSGGD EEKVGVDDE
Arabidopsis Description
At2g15440 [Source:UniProtKB/TrEMBL;Acc:Q9SJN8]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.