CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013845.1-P	Field mustard	cytosol	57.93	100.0
CDY03407	Canola	plastid	91.91	91.32
CDX92660	Canola	plastid	80.58	79.81
AT4G24910.1	Thale cress	plastid	78.64	77.14
Solyc11g020540.1.1	Tomato	cytosol	11.0	50.75
KRH57238	Soybean	golgi	44.01	46.58
KRH63768	Soybean	plastid	43.69	46.23
KRH54181	Soybean	plastid	44.66	45.39
KRH03967	Soybean	vacuole	46.28	43.2
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular, golgi	35.28	42.41
PGSC0003DMT400039556	Potato	golgi	36.89	42.38
GSMUA_Achr9P01440_001	Banana	golgi	35.92	42.37
Solyc11g020470.1.1	Tomato	cytosol	19.74	40.4
Solyc03g110890.1.1	Tomato	plasma membrane, vacuole	38.84	39.87
Zm00001d001763_P001	Maize	plasma membrane	31.72	34.88
OQU82596	Sorghum	plastid	33.01	34.46
TraesCS1D01G370900.1	Wheat	extracellular, plasma membrane	28.8	33.09
TraesCS1A01G365400.1	Wheat	golgi	29.13	32.61
TraesCS1B01G382900.1	Wheat	plasma membrane, vacuole	28.8	32.48
CDY31075	Canola	endoplasmic reticulum, golgi, plasma membrane	28.16	30.96
CDY20685	Canola	endoplasmic reticulum, golgi, plasma membrane	28.16	30.96
CDY48797	Canola	golgi, plasma membrane	28.16	29.29
CDY07428	Canola	endoplasmic reticulum, golgi	27.18	28.87
CDY12639	Canola	endoplasmic reticulum, golgi	26.86	28.82
CDY27638	Canola	endoplasmic reticulum	26.86	28.72
CDX84898	Canola	endoplasmic reticulum	26.86	28.72
CDY28894	Canola	endoplasmic reticulum, golgi	26.86	28.52
CDY62313	Canola	plastid	29.45	28.44
CDY37228	Canola	plastid	29.45	28.17
CDY13145	Canola	plastid	29.77	28.05
CDY15292	Canola	golgi	26.86	28.04
CDX93751	Canola	golgi	26.86	28.04
CDX81329	Canola	plastid	27.83	27.92
CDY51186	Canola	endoplasmic reticulum, plasma membrane	26.54	27.8
CDX89660	Canola	plastid	29.77	27.79
CDX96332	Canola	endoplasmic reticulum, extracellular	26.54	27.7
CDY12819	Canola	golgi, mitochondrion, plasma membrane, plastid	27.83	27.3
CDY01429	Canola	golgi, mitochondrion, plasma membrane, plastid	27.51	26.98
CDY17753	Canola	endoplasmic reticulum, golgi	28.16	26.85
CDY30600	Canola	endoplasmic reticulum, golgi	28.16	26.85
CDX72815	Canola	endoplasmic reticulum, extracellular	25.57	26.25
CDY37946	Canola	extracellular	22.33	26.04
Os11t0488500-01	Rice	cytosol, nucleus	12.62	12.0

Protein Annotations

MapMan:35.1	GO:A0A078HC13	UniProt:A0A078HC13	EnsemblPlants:CDY34323	ProteinID:CDY34323	ProteinID:CDY34323.1
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0045492
EnsemblPlantsGene:GSBRNA2T00056362001	InterPro:IRX15/IRX15L/IGXM	PFAM:PF04669	PANTHER:PTHR31444	PANTHER:PTHR31444:SF7	InterPro:Polysacc_synth_dom
TIGRFAMs:TIGR01627	UniParc:UPI0004EEF50C	SEG:seg	:	:	:

Description

BnaA01g14260DBnaA01g14260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HC13]

Coordinates

chrLK032332:-:302056..302985

Molecular Weight (calculated)

34755.8 Da

IEP (calculated)

10.193

GRAVY (calculated)

-0.363

Length

309 amino acids

Sequence
(BLAST)

001: MPPQLHQSSL HILNPLLRFS PPSSPDNPKH QKESKFTMPK LTVRKLIPLL IFILTSFSVL RLLRISLKSS SPASRPFSSN IFRLSPAESS QQANASQSAL
101: TEKELKLLSD TVALRSPCNV LVFGYAHEYL MLSSLNTRGI TVIIDDESSK IMTPNNTRVY SLKYHQMEVK NTYKLLRHAR SNPSCAPNMN KLHQGSPDCK
201: LKLKDLPQEV HNTKWDVIVV DGPIGDDLEA SGRMGSIYTA AVLARRGSSN STTDVLVHDV QRTAEKWFSW EFLCQENQVS AKGNLWKFRI KGQSNASRFC
301: SPETSLVRY

Best Arabidopsis Sequence Match ( AT4G24910.1 )
(BLAST)

001: MPPQFHQSSL SILNPLLRFS PPSSPDNPKH QRLSTIKMPK FTVRKLIPLL IFVLSSLSVL RLLRISYKSS SKSQSSSSTT FRLSPADSSQ QLRANEGPTA
101: LMEKELKLLS DTVTRRSPCN ILVFGFAPQY LMLSSINTRG ITVILEDEPA KIMIPKAEVN PNNTRIYSLK YHQMEVRNAY NLLQHARANP ACAPNMNNQH
201: QGSSDCKLEL RDLPQQVHNT KWDVIVVDGP RGDDLETPGR MGSIYTAAVL ARKGSSNSTT DVFVHDVHRT AEKWLSWEFL CQENLVSAKG TFWKFRIKRQ
301: SNASRFCSPE TVIIR

Arabidopsis Description

Glucuronoxylan 4-O-methyltransferase-like protein (DUF579) [Source:UniProtKB/TrEMBL;Acc:Q9SW35]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.