Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27341663
|
msms PMID:
27341663
doi
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU82596 | Sorghum | plastid | 92.17 | 87.5 |
| TraesCS1D01G370900.1 | Wheat | extracellular, plasma membrane | 73.67 | 76.95 |
| TraesCS1A01G365400.1 | Wheat | golgi | 74.73 | 76.09 |
| TraesCS1B01G382900.1 | Wheat | plasma membrane, vacuole | 73.67 | 75.55 |
| Solyc11g020540.1.1 | Tomato | cytosol | 11.03 | 46.27 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, extracellular, golgi | 40.21 | 43.97 |
| Bra013845.1-P | Field mustard | cytosol | 25.62 | 40.22 |
| GSMUA_Achr9P01440_001 | Banana | golgi | 36.3 | 38.93 |
| KRH57238 | Soybean | golgi | 36.3 | 34.93 |
| Zm00001d003239_P001 | Maize | cytosol | 20.28 | 34.13 |
| CDX92660 | Canola | plastid | 37.72 | 33.97 |
| Solyc11g020470.1.1 | Tomato | cytosol | 18.15 | 33.77 |
| CDY03407 | Canola | plastid | 37.01 | 33.44 |
| KRH63768 | Soybean | plastid | 34.52 | 33.22 |
| Bra019203.1-P | Field mustard | plastid | 36.3 | 32.69 |
| AT4G24910.1 | Thale cress | plastid | 36.3 | 32.38 |
| CDY34323 | Canola | plastid | 34.88 | 31.72 |
| KRH54181 | Soybean | plastid | 34.16 | 31.58 |
| KRH03967 | Soybean | vacuole | 37.01 | 31.42 |
| PGSC0003DMT400039556 | Potato | golgi | 29.89 | 31.23 |
| Zm00001d007327_P001 | Maize | plasma membrane | 33.45 | 30.62 |
| Zm00001d041782_P001 | Maize | plasma membrane | 30.96 | 29.19 |
| Zm00001d023950_P001 | Maize | mitochondrion | 30.25 | 27.51 |
| Zm00001d014532_P001 | Maize | plasma membrane | 30.96 | 27.1 |
| Solyc03g110890.1.1 | Tomato | plasma membrane, vacuole | 28.83 | 26.91 |
| Zm00001d015307_P001 | Maize | golgi, mitochondrion, plastid | 30.25 | 26.32 |
| Zm00001d002066_P001 | Maize | plasma membrane | 30.61 | 25.67 |
| Zm00001d007269_P001 | Maize | mitochondrion, plastid | 29.18 | 25.08 |
| Zm00001d028737_P001 | Maize | golgi | 14.23 | 23.67 |
| Zm00001d027968_P001 | Maize | cytosol, mitochondrion, plastid | 14.59 | 13.23 |
| Os11t0488500-01 | Rice | cytosol, nucleus | 13.17 | 11.38 |
Protein Annotations
| MapMan:35.1 | UniProt:A0A1D6DSN2 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005975 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016740 | GO:GO:0032259 | GO:GO:0045492 | InterPro:IRX15/IRX15L/IGXM | ProteinID:ONM11916.1 |
| PFAM:PF04669 | PANTHER:PTHR31444 | PANTHER:PTHR31444:SF7 | InterPro:Polysacc_synth_dom | TIGRFAMs:TIGR01627 | TMHMM:TMhelix |
| UniParc:UPI0008430F0E | EnsemblPlantsGene:Zm00001d001763 | EnsemblPlants:Zm00001d001763_P001 | EnsemblPlants:Zm00001d001763_T001 | SEG:seg | : |
Description
Probable methyltransferase
Coordinates
chr2:-:40178..41023
Molecular Weight (calculated)
29352.2 Da
IEP (calculated)
9.030
GRAVY (calculated)
0.178
Length
281 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPPKQLLTI VIIIFSTLSF IKLLLLTSSS SSSAGFTSRS SPAWDADGGG NGTARSALAS KELALLRSVI AARAPCRLLV FGLSPQLLAL AKLNFGAGAG
101: AATAFVTDSA DDADAARRAL LSDRGAGSTA AAAVHQTRYR DAAAEAWPLL RRARGSPACR RPTGTVRKSG CPLALTSLPR EVLDARWDVV VVDGPSGAAP
201: EEPGRMGTIY TAAALARAMA GGEAVDVAVH DVDRTVERWY AWEYLCEDNL VAAKGRLWHF RIAAGAGPTD AFCSIGPVHI L
101: AATAFVTDSA DDADAARRAL LSDRGAGSTA AAAVHQTRYR DAAAEAWPLL RRARGSPACR RPTGTVRKSG CPLALTSLPR EVLDARWDVV VVDGPSGAAP
201: EEPGRMGTIY TAAALARAMA GGEAVDVAVH DVDRTVERWY AWEYLCEDNL VAAKGRLWHF RIAAGAGPTD AFCSIGPVHI L
001: MPPQFHQSSL SILNPLLRFS PPSSPDNPKH QRLSTIKMPK FTVRKLIPLL IFVLSSLSVL RLLRISYKSS SKSQSSSSTT FRLSPADSSQ QLRANEGPTA
101: LMEKELKLLS DTVTRRSPCN ILVFGFAPQY LMLSSINTRG ITVILEDEPA KIMIPKAEVN PNNTRIYSLK YHQMEVRNAY NLLQHARANP ACAPNMNNQH
201: QGSSDCKLEL RDLPQQVHNT KWDVIVVDGP RGDDLETPGR MGSIYTAAVL ARKGSSNSTT DVFVHDVHRT AEKWLSWEFL CQENLVSAKG TFWKFRIKRQ
301: SNASRFCSPE TVIIR
101: LMEKELKLLS DTVTRRSPCN ILVFGFAPQY LMLSSINTRG ITVILEDEPA KIMIPKAEVN PNNTRIYSLK YHQMEVRNAY NLLQHARANP ACAPNMNNQH
201: QGSSDCKLEL RDLPQQVHNT KWDVIVVDGP RGDDLETPGR MGSIYTAAVL ARKGSSNSTT DVFVHDVHRT AEKWLSWEFL CQENLVSAKG TFWKFRIKRQ
301: SNASRFCSPE TVIIR
Arabidopsis Description
Glucuronoxylan 4-O-methyltransferase-like protein (DUF579) [Source:UniProtKB/TrEMBL;Acc:Q9SW35]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.