CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
endoplasmic reticulum 1
nucleus 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63768	Soybean	plastid	87.83	91.44
KRH57238	Soybean	golgi	64.8	67.47
KRH03967	Soybean	vacuole	70.07	64.35
Solyc11g020540.1.1	Tomato	cytosol	13.16	59.7
Bra013845.1-P	Field mustard	cytosol	29.28	49.72
Solyc11g020470.1.1	Tomato	cytosol	24.34	49.01
GSMUA_Achr9P01440_001	Banana	golgi	40.13	46.56
PGSC0003DMT400039556	Potato	golgi	40.79	46.1
CDY03407	Canola	plastid	46.38	45.34
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular, golgi	38.16	45.14
CDY34323	Canola	plastid	45.39	44.66
CDX92660	Canola	plastid	45.39	44.23
Solyc03g110890.1.1	Tomato	plasma membrane, vacuole	43.09	43.52
AT4G24910.1	Thale cress	plastid	45.07	43.49
Bra019203.1-P	Field mustard	plastid	43.75	42.63
TraesCS1D01G370900.1	Wheat	extracellular, plasma membrane	30.92	34.94
Zm00001d001763_P001	Maize	plasma membrane	31.58	34.16
TraesCS1A01G365400.1	Wheat	golgi	30.92	34.06
TraesCS1B01G382900.1	Wheat	plasma membrane, vacuole	30.26	33.58
OQU82596	Sorghum	plastid	32.57	33.45
KRH58773	Soybean	endoplasmic reticulum, plasma membrane, vacuole	26.32	28.88
KRH06938	Soybean	endoplasmic reticulum, plasma membrane, vacuole	27.96	28.72
KRH31488	Soybean	endoplasmic reticulum, golgi	26.64	28.52
KRH06044	Soybean	endoplasmic reticulum, golgi, vacuole	25.99	28.21
KRH04549	Soybean	plastid	28.62	27.62
KRH64803	Soybean	golgi, plasma membrane	27.63	27.45
KRH42675	Soybean	endoplasmic reticulum	25.66	27.27
KRH57814	Soybean	mitochondrion	27.96	26.9
KRH77040	Soybean	mitochondrion	26.64	26.64
KRH50341	Soybean	golgi, plastid	26.97	26.37
KRG94533	Soybean	golgi, mitochondrion	26.64	26.3
KRH28432	Soybean	mitochondrion	26.32	25.97
KRG97408	Soybean	plastid	26.97	25.62
KRH70689	Soybean	plastid	26.32	24.77
KRH50678	Soybean	cytosol	5.26	22.54
KRH50677	Soybean	mitochondrion	6.25	17.27
Os11t0488500-01	Rice	cytosol, nucleus	10.53	9.85

Protein Annotations

EntrezGene:100798729	MapMan:35.1	EMBL:ACUP02003506	EnsemblPlantsGene:GLYMA_06G169900	GO:GO:0005575	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0045492	InterPro:IRX15/IRX15L/IGXM	UniProt:K7KVJ7	EnsemblPlants:KRH54181	ProteinID:KRH54181	ProteinID:KRH54181.1
PFAM:PF04669	PANTHER:PTHR31444	PANTHER:PTHR31444:SF7	InterPro:Polysacc_synth_dom	TIGRFAMs:TIGR01627	TMHMM:TMhelix
UniParc:UPI0002338625	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:14189839..14190753

Molecular Weight (calculated)

33818.2 Da

IEP (calculated)

10.308

GRAVY (calculated)

-0.188

Length

304 amino acids

Sequence
(BLAST)

001: MPPDVIQFRP TLAPLQFSSQ LTLKQRSSPR DHRQGMNLTN KKKLMPILLL ILSIISILRL LSLILRTSSS ATMSPPPSSS LFSTHNKVAK HAPDSSKHPN
101: STLTEKEFKV LSNLVALKSP SNLLIFGFQP QYLTLSSMNA PGSTIFLYDD MIAKVATNSN NTQTYKLGYN VPSKKAYNLL KHARQNQLAC APSYPKLLLQ
201: KSKCKLALMN LPAEVYEKKW DIIVVDGPKG DSPESPGRMG SIYTASVLAR AGNVSDVVVH DVDRMIEKWF SLEFLCHENL LCSKGKLWHF RISGHSNSTT
301: FCTS

Best Arabidopsis Sequence Match ( AT4G24910.1 )
(BLAST)

001: MPPQFHQSSL SILNPLLRFS PPSSPDNPKH QRLSTIKMPK FTVRKLIPLL IFVLSSLSVL RLLRISYKSS SKSQSSSSTT FRLSPADSSQ QLRANEGPTA
101: LMEKELKLLS DTVTRRSPCN ILVFGFAPQY LMLSSINTRG ITVILEDEPA KIMIPKAEVN PNNTRIYSLK YHQMEVRNAY NLLQHARANP ACAPNMNNQH
201: QGSSDCKLEL RDLPQQVHNT KWDVIVVDGP RGDDLETPGR MGSIYTAAVL ARKGSSNSTT DVFVHDVHRT AEKWLSWEFL CQENLVSAKG TFWKFRIKRQ
301: SNASRFCSPE TVIIR

Arabidopsis Description

Glucuronoxylan 4-O-methyltransferase-like protein (DUF579) [Source:UniProtKB/TrEMBL;Acc:Q9SW35]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.