CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

plastid 3
vacuole 4
mitochondrion 2
endoplasmic reticulum 3
extracellular 2
plasma membrane 3
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	vacuole
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG94533	Soybean	golgi, mitochondrion	89.19	85.71
KRH31488	Soybean	endoplasmic reticulum, golgi	50.0	52.11
KRH58773	Soybean	endoplasmic reticulum, plasma membrane, vacuole	48.65	51.99
KRH42675	Soybean	endoplasmic reticulum	49.32	51.05
GSMUA_Achr9P01430_001	Banana	extracellular	47.3	48.61
GSMUA_Achr3P19550_001	Banana	mitochondrion	46.96	48.43
KRG97408	Soybean	plastid	51.01	47.19
HORVU3Hr1G108120.1	Barley	extracellular, plasma membrane, vacuole	42.23	42.81
TraesCS2B01G398500.1	Wheat	extracellular	42.57	42.71
TraesCS3D01G492500.1	Wheat	extracellular	41.89	42.47
TraesCS2D01G377700.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	42.23	42.37
TraesCS3B01G545900.1	Wheat	extracellular	41.89	42.32
TraesCS2A01G381200.1	Wheat	extracellular	41.89	42.03
Zm00001d007327_P001	Maize	plasma membrane	42.91	41.37
Os11t0490100-01	Rice	plasma membrane	41.89	41.06
KRH50678	Soybean	cytosol	9.8	40.85
KRH06044	Soybean	endoplasmic reticulum, golgi, vacuole	36.49	38.57
HORVU2Hr1G089430.1	Barley	endoplasmic reticulum, peroxisome, plastid	42.23	36.76
KRH64803	Soybean	golgi, plasma membrane	36.49	35.29
KRH28432	Soybean	mitochondrion	32.09	30.84
KRH04549	Soybean	plastid	32.77	30.79
KRH57814	Soybean	mitochondrion	32.77	30.7
KRH77040	Soybean	mitochondrion	31.42	30.59
KRH50341	Soybean	golgi, plastid	32.09	30.55
KRH50677	Soybean	mitochondrion	11.15	30.0
KRH70689	Soybean	plastid	31.76	29.1
KRH57238	Soybean	golgi	28.38	28.77
KRH54181	Soybean	plastid	28.72	27.96
KRH63768	Soybean	plastid	27.36	27.74
KRH03967	Soybean	vacuole	28.38	25.38

Protein Annotations

EMBL:ACUP02009901	EnsemblPlants:KRH06938	EnsemblPlantsGene:GLYMA_16G056100	EntrezGene:100812633	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0045492	InterPro:IRX15/IRX15L/IGXM	InterPro:Polysacc_synth_dom
PANTHER:PTHR31444	PANTHER:PTHR31444:SF1	PFAM:PF04669	ProteinID:KRH06938	ProteinID:KRH06938.1	SEG:seg
TIGRFAMs:TIGR01627	UniParc:UPI000233C046	UniProt:I1MLH3	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr16:+:5518930..5519893

Molecular Weight (calculated)

32964.0 Da

IEP (calculated)

9.354

GRAVY (calculated)

-0.071

Length

296 amino acids

Sequence
(BLAST)

001: MQPSNKKKHP PTSSPAPRLL PLLAATLFLL FLFRQTLLHP TADLCFSSSS AVPLSPSEAT IAAEFDSSPL TLVTILHYAT ARALPQQTKG EIRRSFDVLQ
101: SLAPCNFLVF GLGHDSLMWD SFNPRGTTLF LEEDPKWTLS ALQRFPILRA HIVRYSTRLA EAKELLSSYK DYCPGVSKNT TDHPLKGDRW CKLALGTLPN
201: EVYNRDWDVI MIDGPRGYFA AAPGRMAVIY SAAMMARGRK GSGVTHVFLH DVDRGVEKQY AKEFLCMKYR VGGIGKLWHF VIPPVVNPSD IAHGFC

Best Arabidopsis Sequence Match ( AT1G09610.1 )
(BLAST)

001: MRPKANQNHK LKVLLVFLLA TLILIFIVRS TLTSSQEHQT PQETRSTRCS GACNKLPRSL AQALIHYSTS VITPQQTLKE IAVSSRVLGK KSPCNFLVFG
101: LGHDSLMWSS LNYGGRTVFL EEDEAWIKQI KRRFPMLESY HVTYDSKVNQ ADNLIEVGKG PECTAIGDPR YSMCQLALKG LPAEIYETGW DLIMVDAPTG
201: YYDEAPGRMT AIYTAGMMAR NRKQGGETDV FVHDVNREIE DKFSKAFLCE GYMKKQEGRL RHFIIPSYRD GSESESNRPF CP

Arabidopsis Description

GXM1GXM3 [Source:UniProtKB/TrEMBL;Acc:A0A178W7U8]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.