Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G381200.1 | Wheat | extracellular | 97.29 | 97.29 |
| TraesCS2B01G398500.1 | Wheat | extracellular | 96.95 | 96.95 |
| TraesCS3D01G492500.1 | Wheat | extracellular | 84.75 | 85.62 |
| HORVU2Hr1G089430.1 | Barley | endoplasmic reticulum, peroxisome, plastid | 96.27 | 83.53 |
| Os11t0490100-01 | Rice | plasma membrane | 77.29 | 75.5 |
| Zm00001d007327_P001 | Maize | plasma membrane | 73.22 | 70.36 |
| GSMUA_Achr9P01430_001 | Banana | extracellular | 56.95 | 58.33 |
| GSMUA_Achr3P19550_001 | Banana | mitochondrion | 54.24 | 55.75 |
| KRH31488 | Soybean | endoplasmic reticulum, golgi | 47.8 | 49.65 |
| Bra032854.1-P | Field mustard | endoplasmic reticulum | 48.47 | 49.48 |
| CDX84898 | Canola | endoplasmic reticulum | 48.47 | 49.48 |
| CDY27638 | Canola | endoplasmic reticulum | 48.47 | 49.48 |
| CDY28894 | Canola | endoplasmic reticulum, golgi | 48.47 | 49.14 |
| CDY07428 | Canola | endoplasmic reticulum, golgi | 48.14 | 48.8 |
| Bra004093.1-P | Field mustard | endoplasmic reticulum, golgi | 48.14 | 48.8 |
| AT1G27930.1 | Thale cress | endoplasmic reticulum, plasma membrane | 47.8 | 48.79 |
| KRH58773 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 45.76 | 48.74 |
| CDY12639 | Canola | endoplasmic reticulum, golgi | 47.46 | 48.61 |
| Bra034005.1-P | Field mustard | endoplasmic reticulum, golgi | 47.46 | 48.61 |
| KRH42675 | Soybean | endoplasmic reticulum | 46.78 | 48.25 |
| Bra030066.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 46.78 | 47.75 |
| CDY51186 | Canola | endoplasmic reticulum, plasma membrane | 47.46 | 47.46 |
| AT1G67330.1 | Thale cress | endoplasmic reticulum, golgi | 46.78 | 47.42 |
| VIT_14s0068g01970.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 44.75 | 46.81 |
| VIT_01s0010g03680.t01 | Wine grape | endoplasmic reticulum, golgi | 43.39 | 45.55 |
| KRG97408 | Soybean | plastid | 48.14 | 44.38 |
| PGSC0003DMT400084744 | Potato | endoplasmic reticulum | 42.37 | 44.33 |
| Solyc07g015920.1.1 | Tomato | extracellular | 40.34 | 43.27 |
| PGSC0003DMT400077009 | Potato | extracellular | 40.0 | 42.91 |
| KRH06938 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 42.37 | 42.23 |
| KRG94533 | Soybean | golgi, mitochondrion | 43.73 | 41.88 |
| TraesCS5D01G319700.1 | Wheat | mitochondrion | 41.36 | 40.94 |
| TraesCS7D01G549800.1 | Wheat | mitochondrion, plastid | 41.69 | 40.2 |
| TraesCS4D01G086700.1 | Wheat | mitochondrion | 36.61 | 33.13 |
| TraesCS1D01G370900.1 | Wheat | extracellular, plasma membrane | 27.12 | 29.74 |
| TraesCS6D01G121700.1 | Wheat | mitochondrion | 32.88 | 29.66 |
| TraesCS2D01G513800.1 | Wheat | golgi, plastid | 30.85 | 28.8 |
| TraesCS7D01G432300.1 | Wheat | golgi, mitochondrion | 32.2 | 28.02 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G377700.1 | EnsemblPlantsGene:TraesCS2D01G377700 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045492 | InterPro:IRX15/IRX15L/IGXM | InterPro:Polysacc_synth_dom | PANTHER:PTHR31444 | PANTHER:PTHR31444:SF1 |
| PFAM:PF04669 | SEG:seg | TIGRFAMs:TIGR01627 | TMHMM:TMhelix | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr2D:-:482174234..482175310
Molecular Weight (calculated)
32152.8 Da
IEP (calculated)
8.704
GRAVY (calculated)
-0.013
Length
295 amino acids
Sequence
(BLAST)
(BLAST)
001: MKPPGRIATA AAAALLVATS LLVATLLTSP LPLLPLLPCL PGVLAPSGVG YEPSGLAALA DAAVYYATTR TVPQQSRAEI SLSLDVLRRR APVRLLVFGL
101: GHDSRLWHAL NPGGVTVFLE EDPEWYRIVR ARSPFLRAHL VTYRTRMDHA DLLFDSYKNF SSCVPGAGAE AADAPVQVRD NAACPLALHN LPPEVYENEW
201: DMLMLDAPKG YFASAPGRMA AIWTAAAMAR ARRGEGDTDV FLHDVDRKVE KRYAEEFLCD MFRVGKTGRL WHFSIPPVSR RGNTTASGGG KRPFC
101: GHDSRLWHAL NPGGVTVFLE EDPEWYRIVR ARSPFLRAHL VTYRTRMDHA DLLFDSYKNF SSCVPGAGAE AADAPVQVRD NAACPLALHN LPPEVYENEW
201: DMLMLDAPKG YFASAPGRMA AIWTAAAMAR ARRGEGDTDV FLHDVDRKVE KRYAEEFLCD MFRVGKTGRL WHFSIPPVSR RGNTTASGGG KRPFC
001: MNTLIPSEKR WIITGVLLAG LVGGALLFTS FIRAADETLF LCSTASAKSR AVAAAADYEA TPIQLQAIVH YATSNVVPQQ NLAEISISFN ILKKLAPANF
101: LVFGLGRDSL MWASLNPRGK TLFLEEDLEW FQKVTKDSPF LRAHHVRYRT QLQQADSLLR SYKTEPKCFP AKSYLRGNEK CKLALTGLPD EFYDTEWDLL
201: MVDAPKGYFA EAPGRMAAIF SAAVMARNRK KPGVTHVFLH DVNRRVEKTF AEEFLCRKYR VNAAGRLWHF AIPPAAANAT IDSGDYRFC
101: LVFGLGRDSL MWASLNPRGK TLFLEEDLEW FQKVTKDSPF LRAHHVRYRT QLQQADSLLR SYKTEPKCFP AKSYLRGNEK CKLALTGLPD EFYDTEWDLL
201: MVDAPKGYFA EAPGRMAAIF SAAVMARNRK KPGVTHVFLH DVNRRVEKTF AEEFLCRKYR VNAAGRLWHF AIPPAAANAT IDSGDYRFC
Arabidopsis Description
Probable methyltransferase At1g27930 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7F9]
SUBAcon: [endoplasmic reticulum,plasma membrane]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.