Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G381200.1 | Wheat | extracellular | 96.95 | 96.95 |
| TraesCS2D01G377700.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 96.95 | 96.95 |
| TraesCS3B01G545900.1 | Wheat | extracellular | 85.08 | 85.67 |
| HORVU2Hr1G089430.1 | Barley | endoplasmic reticulum, peroxisome, plastid | 95.59 | 82.94 |
| Os11t0490100-01 | Rice | plasma membrane | 78.64 | 76.82 |
| Zm00001d007327_P001 | Maize | plasma membrane | 73.56 | 70.68 |
| GSMUA_Achr9P01430_001 | Banana | extracellular | 57.29 | 58.68 |
| GSMUA_Achr3P19550_001 | Banana | mitochondrion | 55.25 | 56.79 |
| KRH31488 | Soybean | endoplasmic reticulum, golgi | 47.8 | 49.65 |
| CDY28894 | Canola | endoplasmic reticulum, golgi | 48.81 | 49.48 |
| CDY27638 | Canola | endoplasmic reticulum | 48.47 | 49.48 |
| CDX84898 | Canola | endoplasmic reticulum | 48.47 | 49.48 |
| Bra032854.1-P | Field mustard | endoplasmic reticulum | 48.47 | 49.48 |
| CDY07428 | Canola | endoplasmic reticulum, golgi | 48.47 | 49.14 |
| Bra004093.1-P | Field mustard | endoplasmic reticulum, golgi | 48.47 | 49.14 |
| KRH58773 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 46.1 | 49.1 |
| AT1G27930.1 | Thale cress | endoplasmic reticulum, plasma membrane | 47.8 | 48.79 |
| CDY12639 | Canola | endoplasmic reticulum, golgi | 47.46 | 48.61 |
| Bra034005.1-P | Field mustard | endoplasmic reticulum, golgi | 47.46 | 48.61 |
| KRH42675 | Soybean | endoplasmic reticulum | 46.44 | 47.9 |
| VIT_14s0068g01970.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 45.76 | 47.87 |
| Bra030066.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 46.78 | 47.75 |
| CDY51186 | Canola | endoplasmic reticulum, plasma membrane | 47.46 | 47.46 |
| AT1G67330.1 | Thale cress | endoplasmic reticulum, golgi | 46.78 | 47.42 |
| VIT_01s0010g03680.t01 | Wine grape | endoplasmic reticulum, golgi | 44.07 | 46.26 |
| KRG97408 | Soybean | plastid | 48.47 | 44.69 |
| PGSC0003DMT400084744 | Potato | endoplasmic reticulum | 42.03 | 43.97 |
| Solyc07g015920.1.1 | Tomato | extracellular | 40.34 | 43.27 |
| PGSC0003DMT400077009 | Potato | extracellular | 40.0 | 42.91 |
| KRH06938 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 42.71 | 42.57 |
| KRG94533 | Soybean | golgi, mitochondrion | 44.07 | 42.21 |
| TraesCS7B01G485000.1 | Wheat | mitochondrion, plastid | 42.03 | 41.2 |
| TraesCS5B01G313900.1 | Wheat | golgi, unclear | 40.34 | 39.67 |
| TraesCS4B01G089200.1 | Wheat | mitochondrion | 36.61 | 33.44 |
| TraesCS1B01G382900.1 | Wheat | plasma membrane, vacuole | 27.46 | 29.56 |
| TraesCS6B01G160200.1 | Wheat | mitochondrion | 33.22 | 29.52 |
| TraesCS2B01G540300.1 | Wheat | golgi | 30.85 | 28.8 |
| TraesCS7B01G341900.1 | Wheat | golgi, mitochondrion | 32.54 | 28.07 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G398500.1 | EnsemblPlantsGene:TraesCS2B01G398500 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045492 | InterPro:IRX15/IRX15L/IGXM | InterPro:Polysacc_synth_dom | PANTHER:PTHR31444 | PANTHER:PTHR31444:SF1 |
| PFAM:PF04669 | SEG:seg | TIGRFAMs:TIGR01627 | TMHMM:TMhelix | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr2B:-:566008804..566009846
Molecular Weight (calculated)
32133.9 Da
IEP (calculated)
8.468
GRAVY (calculated)
0.005
Length
295 amino acids
Sequence
(BLAST)
(BLAST)
001: MKPPGRLATA AAAALLVATS LLVATLLTSP LPLLPLLPCL PGVLAPSGVG YEPSGLAALA DAAVYYATTR TVPQQSRAEI SLSLDVLRRR APIRLLVFGL
101: GHDSRLWHAL NPGGVTVFLE EDPEWYRIVR AKSPFLRAHL VSYRTRMDHA DLLLDSYKNF SSCVPGAGAE AADAPVLVRD NAACPLALHN LPPEVYENEW
201: DMLMLDAPKG YFASAPGRMA AIWTAAAMAR ARRGEGDTDV FLHDVDRRVE KKYAEEFLCD MFRVGKTGRL WHFSIPPVSR RGNTTASGDG KRPFC
101: GHDSRLWHAL NPGGVTVFLE EDPEWYRIVR AKSPFLRAHL VSYRTRMDHA DLLLDSYKNF SSCVPGAGAE AADAPVLVRD NAACPLALHN LPPEVYENEW
201: DMLMLDAPKG YFASAPGRMA AIWTAAAMAR ARRGEGDTDV FLHDVDRRVE KKYAEEFLCD MFRVGKTGRL WHFSIPPVSR RGNTTASGDG KRPFC
001: MNTLIPSEKR WIITGVLLAG LVGGALLFTS FIRAADETLF LCSTASAKSR AVAAAADYEA TPIQLQAIVH YATSNVVPQQ NLAEISISFN ILKKLAPANF
101: LVFGLGRDSL MWASLNPRGK TLFLEEDLEW FQKVTKDSPF LRAHHVRYRT QLQQADSLLR SYKTEPKCFP AKSYLRGNEK CKLALTGLPD EFYDTEWDLL
201: MVDAPKGYFA EAPGRMAAIF SAAVMARNRK KPGVTHVFLH DVNRRVEKTF AEEFLCRKYR VNAAGRLWHF AIPPAAANAT IDSGDYRFC
101: LVFGLGRDSL MWASLNPRGK TLFLEEDLEW FQKVTKDSPF LRAHHVRYRT QLQQADSLLR SYKTEPKCFP AKSYLRGNEK CKLALTGLPD EFYDTEWDLL
201: MVDAPKGYFA EAPGRMAAIF SAAVMARNRK KPGVTHVFLH DVNRRVEKTF AEEFLCRKYR VNAAGRLWHF AIPPAAANAT IDSGDYRFC
Arabidopsis Description
Probable methyltransferase At1g27930 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7F9]
SUBAcon: [endoplasmic reticulum,plasma membrane]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.