Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 5
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g015920.1.1 | Tomato | extracellular | 90.91 | 90.91 |
| PGSC0003DMT400084744 | Potato | endoplasmic reticulum | 61.82 | 60.28 |
| VIT_01s0010g03680.t01 | Wine grape | endoplasmic reticulum, golgi | 55.64 | 54.45 |
| KRH31488 | Soybean | endoplasmic reticulum, golgi | 56.0 | 54.23 |
| KRH42675 | Soybean | endoplasmic reticulum | 54.91 | 52.8 |
| KRH58773 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 53.09 | 52.71 |
| VIT_14s0068g01970.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 52.73 | 51.42 |
| Bra032854.1-P | Field mustard | endoplasmic reticulum | 52.73 | 50.17 |
| CDX84898 | Canola | endoplasmic reticulum | 52.73 | 50.17 |
| CDY27638 | Canola | endoplasmic reticulum | 52.73 | 50.17 |
| AT1G27930.1 | Thale cress | endoplasmic reticulum, plasma membrane | 52.36 | 49.83 |
| Bra030066.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 50.91 | 48.44 |
| KRG97408 | Soybean | plastid | 56.36 | 48.44 |
| CDY28894 | Canola | endoplasmic reticulum, golgi | 50.91 | 48.11 |
| CDY12639 | Canola | endoplasmic reticulum, golgi | 50.18 | 47.92 |
| Bra034005.1-P | Field mustard | endoplasmic reticulum, golgi | 50.18 | 47.92 |
| CDY07428 | Canola | endoplasmic reticulum, golgi | 50.55 | 47.77 |
| Bra004093.1-P | Field mustard | endoplasmic reticulum, golgi | 50.55 | 47.77 |
| CDY51186 | Canola | endoplasmic reticulum, plasma membrane | 50.18 | 46.78 |
| AT1G67330.1 | Thale cress | endoplasmic reticulum, golgi | 49.45 | 46.74 |
| GSMUA_Achr9P01430_001 | Banana | extracellular | 47.64 | 45.49 |
| GSMUA_Achr3P19550_001 | Banana | mitochondrion | 45.82 | 43.9 |
| HORVU3Hr1G108120.1 | Barley | extracellular, plasma membrane, vacuole | 43.64 | 41.1 |
| TraesCS3B01G545900.1 | Wheat | extracellular | 43.27 | 40.61 |
| TraesCS3D01G492500.1 | Wheat | extracellular | 42.91 | 40.41 |
| TraesCS2B01G398500.1 | Wheat | extracellular | 42.91 | 40.0 |
| TraesCS2D01G377700.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 42.91 | 40.0 |
| TraesCS2A01G381200.1 | Wheat | extracellular | 42.55 | 39.66 |
| Zm00001d007327_P001 | Maize | plasma membrane | 43.64 | 39.09 |
| Os11t0490100-01 | Rice | plasma membrane | 42.91 | 39.07 |
| PGSC0003DMT400064018 | Potato | plasma membrane | 38.55 | 38.41 |
| PGSC0003DMT400080082 | Potato | endoplasmic reticulum, golgi | 40.0 | 35.71 |
| HORVU2Hr1G089430.1 | Barley | endoplasmic reticulum, peroxisome, plastid | 42.55 | 34.41 |
| PGSC0003DMT400039556 | Potato | golgi | 29.09 | 29.74 |
| PGSC0003DMT400065494 | Potato | golgi, plasma membrane, plastid | 31.27 | 28.48 |
| PGSC0003DMT400064322 | Potato | plastid | 30.91 | 27.6 |
| PGSC0003DMT400066571 | Potato | endoplasmic reticulum, golgi, mitochondrion, plastid | 29.82 | 26.11 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400077009 | EnsemblPlantsGene:PGSC0003DMG400029953 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045492 | InterPro:IRX15/IRX15L/IGXM | InterPro:Polysacc_synth_dom | PANTHER:PTHR31444 | PANTHER:PTHR31444:SF1 |
| PFAM:PF04669 | PGSC:PGSC0003DMG400029953 | SEG:seg | SignalP:SignalP-TM | TIGRFAMs:TIGR01627 | UniParc:UPI00029512C3 |
| UniProt:M1CXS7 | MapMan:35.1 | : | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400029953]
Coordinates
chr7:-:8615784..8616857
Molecular Weight (calculated)
31194.8 Da
IEP (calculated)
6.394
GRAVY (calculated)
-0.097
Length
275 amino acids
Sequence
(BLAST)
(BLAST)
001: MLKLAIIGLT CTTLLILILF RMSNDPTLCE PSEVSGILPN GNSTVNDDTI MSEHLQVDAI LHYATSRVIP QQTMDEIKIS FNILKSLTPC NLLVFGLGHD
101: SFMWSSINLR GTTLFLEEDP KWSRAILKDL SFIRSNTVRY RTTLYEAEKL IEHYNKEPDC WARKSILRGN SKCKLALNML SNEVYDKEWD IIMIDGPKGY
201: FDQAPGRMSA IYSAAVMARN RKGPGVTHVV MHDVDRDVEK VYAELFLCRK NLVDGVGKLW HFEIPPASDV NTDFC
101: SFMWSSINLR GTTLFLEEDP KWSRAILKDL SFIRSNTVRY RTTLYEAEKL IEHYNKEPDC WARKSILRGN SKCKLALNML SNEVYDKEWD IIMIDGPKGY
201: FDQAPGRMSA IYSAAVMARN RKGPGVTHVV MHDVDRDVEK VYAELFLCRK NLVDGVGKLW HFEIPPASDV NTDFC
001: MNTLIPSEKR WIITGVLLAG LVGGALLFTS FIRAADETLF LCSTASAKSR AVAAAADYEA TPIQLQAIVH YATSNVVPQQ NLAEISISFN ILKKLAPANF
101: LVFGLGRDSL MWASLNPRGK TLFLEEDLEW FQKVTKDSPF LRAHHVRYRT QLQQADSLLR SYKTEPKCFP AKSYLRGNEK CKLALTGLPD EFYDTEWDLL
201: MVDAPKGYFA EAPGRMAAIF SAAVMARNRK KPGVTHVFLH DVNRRVEKTF AEEFLCRKYR VNAAGRLWHF AIPPAAANAT IDSGDYRFC
101: LVFGLGRDSL MWASLNPRGK TLFLEEDLEW FQKVTKDSPF LRAHHVRYRT QLQQADSLLR SYKTEPKCFP AKSYLRGNEK CKLALTGLPD EFYDTEWDLL
201: MVDAPKGYFA EAPGRMAAIF SAAVMARNRK KPGVTHVFLH DVNRRVEKTF AEEFLCRKYR VNAAGRLWHF AIPPAAANAT IDSGDYRFC
Arabidopsis Description
Probable methyltransferase At1g27930 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7F9]
SUBAcon: [endoplasmic reticulum,plasma membrane]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.