Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- endoplasmic reticulum 4
- extracellular 3
- vacuole 3
- plasma membrane 3
- golgi 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07428 | Canola | endoplasmic reticulum, golgi | 98.97 | 98.97 |
| CDY12639 | Canola | endoplasmic reticulum, golgi | 87.97 | 88.89 |
| CDY51186 | Canola | endoplasmic reticulum, plasma membrane | 88.32 | 87.12 |
| AT1G67330.1 | Thale cress | endoplasmic reticulum, golgi | 85.57 | 85.57 |
| CDX84898 | Canola | endoplasmic reticulum | 66.32 | 66.78 |
| CDY27638 | Canola | endoplasmic reticulum | 66.32 | 66.78 |
| VIT_01s0010g03680.t01 | Wine grape | endoplasmic reticulum, golgi | 60.82 | 62.99 |
| KRH31488 | Soybean | endoplasmic reticulum, golgi | 58.76 | 60.21 |
| KRH58773 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 57.04 | 59.93 |
| KRH42675 | Soybean | endoplasmic reticulum | 57.73 | 58.74 |
| VIT_14s0068g01970.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 56.7 | 58.51 |
| PGSC0003DMT400084744 | Potato | endoplasmic reticulum | 54.3 | 56.03 |
| GSMUA_Achr3P19550_001 | Banana | mitochondrion | 54.3 | 55.05 |
| KRG97408 | Soybean | plastid | 60.14 | 54.69 |
| GSMUA_Achr9P01430_001 | Banana | extracellular | 53.26 | 53.82 |
| Solyc07g015920.1.1 | Tomato | extracellular | 48.45 | 51.27 |
| PGSC0003DMT400077009 | Potato | extracellular | 48.11 | 50.91 |
| TraesCS3D01G492500.1 | Wheat | extracellular | 50.52 | 50.34 |
| HORVU3Hr1G108120.1 | Barley | extracellular, plasma membrane, vacuole | 50.17 | 50.0 |
| TraesCS3B01G545900.1 | Wheat | extracellular | 50.17 | 49.83 |
| TraesCS2B01G398500.1 | Wheat | extracellular | 49.48 | 48.81 |
| Zm00001d007327_P001 | Maize | plasma membrane | 51.2 | 48.53 |
| TraesCS2D01G377700.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 49.14 | 48.47 |
| TraesCS2A01G381200.1 | Wheat | extracellular | 49.14 | 48.47 |
| Os11t0490100-01 | Rice | plasma membrane | 49.83 | 48.01 |
| CDY20685 | Canola | endoplasmic reticulum, golgi, plasma membrane | 40.55 | 41.99 |
| HORVU2Hr1G089430.1 | Barley | endoplasmic reticulum, peroxisome, plastid | 48.8 | 41.76 |
| CDY31075 | Canola | endoplasmic reticulum, golgi, plasma membrane | 40.21 | 41.64 |
| CDY15292 | Canola | golgi | 41.58 | 40.88 |
| CDX93751 | Canola | golgi | 41.58 | 40.88 |
| CDY48797 | Canola | golgi, plasma membrane | 40.89 | 40.07 |
| CDX96332 | Canola | endoplasmic reticulum, extracellular | 38.49 | 37.84 |
| CDX72815 | Canola | endoplasmic reticulum, extracellular | 38.14 | 36.88 |
| CDY37946 | Canola | extracellular | 29.55 | 32.45 |
| CDY37228 | Canola | plastid | 31.96 | 28.79 |
| CDX81329 | Canola | plastid | 30.24 | 28.57 |
| CDY30600 | Canola | endoplasmic reticulum, golgi | 31.27 | 28.09 |
| CDY17753 | Canola | endoplasmic reticulum, golgi | 31.27 | 28.09 |
| CDY12819 | Canola | golgi, mitochondrion, plasma membrane, plastid | 30.24 | 27.94 |
| CDY62313 | Canola | plastid | 30.58 | 27.81 |
| CDY03407 | Canola | plastid | 29.55 | 27.65 |
| CDY01429 | Canola | golgi, mitochondrion, plasma membrane, plastid | 29.9 | 27.62 |
| CDY13145 | Canola | plastid | 30.58 | 27.13 |
| CDX89660 | Canola | plastid | 30.58 | 26.89 |
| CDY34323 | Canola | plastid | 28.52 | 26.86 |
| CDX92660 | Canola | plastid | 28.18 | 26.28 |
Protein Annotations
| MapMan:35.1 | GO:A0A078GUT0 | UniProt:A0A078GUT0 | EnsemblPlants:CDY28894 | ProteinID:CDY28894 | ProteinID:CDY28894.1 |
| GO:GO:0005575 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0045492 | EnsemblPlantsGene:GSBRNA2T00041584001 | InterPro:IRX15/IRX15L/IGXM | PFAM:PF04669 |
| PANTHER:PTHR31444 | PANTHER:PTHR31444:SF1 | InterPro:Polysacc_synth_dom | TIGRFAMs:TIGR01627 | TMHMM:TMhelix | UniParc:UPI0004EBAC0A |
| SEG:seg | : | : | : | : | : |
Description
BnaC06g26820DBnaC06g26820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GUT0]
Coordinates
chrLK032227:-:475719..476594
Molecular Weight (calculated)
32549.0 Da
IEP (calculated)
6.935
GRAVY (calculated)
-0.116
Length
291 amino acids
Sequence
(BLAST)
(BLAST)
001: MIPEKWKGAK HTLLERPWFI IAALAGLLGG ALLITSIIRA TDSTLSLCST AKTAARSIAE YSTTPIQLQS IVHYATSQTV PQQSFEEISI SLNVLKERIP
101: CNFLVFGLGH DSLMWASLNP RGTTVFLEED PEWIQAVLKD APSLRAHHVQ YRTQLSQADN LLATYRSEPK CLPANAFPIR YNEKCPLALT SLPDEFYDTE
201: WDLIMVDAPK GYFPTAPGRM AAIFSAAIMA RNRKGAGTTH VFLHDVDRIV EKTYANEFLC EKYRVNSAGR LWHFEIPNAA NMSDQPGDRF C
101: CNFLVFGLGH DSLMWASLNP RGTTVFLEED PEWIQAVLKD APSLRAHHVQ YRTQLSQADN LLATYRSEPK CLPANAFPIR YNEKCPLALT SLPDEFYDTE
201: WDLIMVDAPK GYFPTAPGRM AAIFSAAIMA RNRKGAGTTH VFLHDVDRIV EKTYANEFLC EKYRVNSAGR LWHFEIPNAA NMSDQPGDRF C
001: MIQDKSKGAK QTLLERPWFL AVALAGLIGG AMLITSFIRA TDNTLSLCST AKNTAASIAK YTATPIQLQS IVHYATSHTV PQQSFEEISI SLNVLKERLP
101: CNFLVFGLGR DSLMWASLNP GGTTVFLEED PEWIEAVLKD APSLRAHHVQ YRTHLSEAGR LLSTYKNEPM CLPAKAFPIR YNEKCPLALT SLPDEFYDTE
201: WDLIMVDAPK GYFPEAPGRM AAIFSSAIMA RNRKGDGTTH VFLHDVNRKV ENAFANEFLC EKYKVNSVGR LWHFEIPNAA NMTDQPGDRF C
101: CNFLVFGLGR DSLMWASLNP GGTTVFLEED PEWIEAVLKD APSLRAHHVQ YRTHLSEAGR LLSTYKNEPM CLPAKAFPIR YNEKCPLALT SLPDEFYDTE
201: WDLIMVDAPK GYFPEAPGRM AAIFSSAIMA RNRKGDGTTH VFLHDVNRKV ENAFANEFLC EKYKVNSVGR LWHFEIPNAA NMTDQPGDRF C
Arabidopsis Description
At1g67330 [Source:UniProtKB/TrEMBL;Acc:Q9FYG0]
SUBAcon: [endoplasmic reticulum,golgi]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.