Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G545900.1 | Wheat | extracellular | 95.55 | 95.22 |
| HORVU3Hr1G108120.1 | Barley | extracellular, plasma membrane, vacuole | 94.52 | 94.52 |
| TraesCS2D01G377700.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 85.62 | 84.75 |
| Os11t0490100-01 | Rice | plasma membrane | 81.16 | 78.48 |
| Zm00001d007327_P001 | Maize | plasma membrane | 76.37 | 72.64 |
| GSMUA_Achr9P01430_001 | Banana | extracellular | 57.88 | 58.68 |
| GSMUA_Achr3P19550_001 | Banana | mitochondrion | 55.82 | 56.79 |
| Bra032854.1-P | Field mustard | endoplasmic reticulum | 50.34 | 50.87 |
| CDX84898 | Canola | endoplasmic reticulum | 50.34 | 50.87 |
| CDY27638 | Canola | endoplasmic reticulum | 50.34 | 50.87 |
| CDY28894 | Canola | endoplasmic reticulum, golgi | 50.34 | 50.52 |
| Bra004093.1-P | Field mustard | endoplasmic reticulum, golgi | 50.0 | 50.17 |
| CDY07428 | Canola | endoplasmic reticulum, golgi | 50.0 | 50.17 |
| AT1G27930.1 | Thale cress | endoplasmic reticulum, plasma membrane | 48.97 | 49.48 |
| KRH58773 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 46.92 | 49.46 |
| KRH31488 | Soybean | endoplasmic reticulum, golgi | 47.95 | 49.3 |
| Bra034005.1-P | Field mustard | endoplasmic reticulum, golgi | 47.95 | 48.61 |
| CDY12639 | Canola | endoplasmic reticulum, golgi | 47.95 | 48.61 |
| KRH42675 | Soybean | endoplasmic reticulum | 47.6 | 48.6 |
| VIT_14s0068g01970.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 46.92 | 48.58 |
| Bra030066.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 47.6 | 48.1 |
| AT1G67330.1 | Thale cress | endoplasmic reticulum, golgi | 47.6 | 47.77 |
| CDY51186 | Canola | endoplasmic reticulum, plasma membrane | 47.95 | 47.46 |
| VIT_01s0010g03680.t01 | Wine grape | endoplasmic reticulum, golgi | 45.55 | 47.33 |
| KRG97408 | Soybean | plastid | 47.95 | 43.75 |
| PGSC0003DMT400084744 | Potato | endoplasmic reticulum | 41.78 | 43.26 |
| PGSC0003DMT400077009 | Potato | extracellular | 40.41 | 42.91 |
| Solyc07g015920.1.1 | Tomato | extracellular | 40.41 | 42.91 |
| TraesCS5D01G319700.1 | Wheat | mitochondrion | 43.15 | 42.28 |
| KRH06938 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 42.47 | 41.89 |
| TraesCS7D01G549800.1 | Wheat | mitochondrion, plastid | 43.49 | 41.5 |
| KRG94533 | Soybean | golgi, mitochondrion | 43.49 | 41.23 |
| TraesCS4D01G086700.1 | Wheat | mitochondrion | 38.36 | 34.36 |
| TraesCS1D01G370900.1 | Wheat | extracellular, plasma membrane | 30.48 | 33.09 |
| TraesCS6D01G121700.1 | Wheat | mitochondrion | 33.56 | 29.97 |
| TraesCS2D01G513800.1 | Wheat | golgi, plastid | 31.85 | 29.43 |
| TraesCS7D01G432300.1 | Wheat | golgi, mitochondrion | 32.88 | 28.32 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G492500.1 | EnsemblPlantsGene:TraesCS3D01G492500 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045492 | InterPro:IRX15/IRX15L/IGXM | InterPro:Polysacc_synth_dom | PANTHER:PTHR31444 | PANTHER:PTHR31444:SF1 |
| PFAM:PF04669 | SEG:seg | TIGRFAMs:TIGR01627 | TMHMM:TMhelix | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr3D:-:586126571..586127449
Molecular Weight (calculated)
31978.7 Da
IEP (calculated)
8.950
GRAVY (calculated)
-0.028
Length
292 amino acids
Sequence
(BLAST)
(BLAST)
001: MKPPGRLATA AAAALLVAAS LLLATLLTSP LPLLPLLPCL PTVTAPSGDG YAPAGLAALA DAALYYATTP NVPQQSHAEI SLSLAVLRRR APLRLLVFGL
101: GHDSPLWHAL NPGGVTVFLE EDPEWYRIVR AQSPFLRAHL VRYRTRLDHA DVLFRSYRNF PSCVPGADAD GAPLRVRANA ECPLALHNLP PEVYQNEWDM
201: LMVDAPKGYF PSAPGRMAAI WTAAAMARAR RGEGDTDVFL HDVDRRVERM YAEEFLCERF RVGATGRLWH FRIPPVSRRN GTAAGGDKRP FC
101: GHDSPLWHAL NPGGVTVFLE EDPEWYRIVR AQSPFLRAHL VRYRTRLDHA DVLFRSYRNF PSCVPGADAD GAPLRVRANA ECPLALHNLP PEVYQNEWDM
201: LMVDAPKGYF PSAPGRMAAI WTAAAMARAR RGEGDTDVFL HDVDRRVERM YAEEFLCERF RVGATGRLWH FRIPPVSRRN GTAAGGDKRP FC
001: MNTLIPSEKR WIITGVLLAG LVGGALLFTS FIRAADETLF LCSTASAKSR AVAAAADYEA TPIQLQAIVH YATSNVVPQQ NLAEISISFN ILKKLAPANF
101: LVFGLGRDSL MWASLNPRGK TLFLEEDLEW FQKVTKDSPF LRAHHVRYRT QLQQADSLLR SYKTEPKCFP AKSYLRGNEK CKLALTGLPD EFYDTEWDLL
201: MVDAPKGYFA EAPGRMAAIF SAAVMARNRK KPGVTHVFLH DVNRRVEKTF AEEFLCRKYR VNAAGRLWHF AIPPAAANAT IDSGDYRFC
101: LVFGLGRDSL MWASLNPRGK TLFLEEDLEW FQKVTKDSPF LRAHHVRYRT QLQQADSLLR SYKTEPKCFP AKSYLRGNEK CKLALTGLPD EFYDTEWDLL
201: MVDAPKGYFA EAPGRMAAIF SAAVMARNRK KPGVTHVFLH DVNRRVEKTF AEEFLCRKYR VNAAGRLWHF AIPPAAANAT IDSGDYRFC
Arabidopsis Description
Probable methyltransferase At1g27930 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7F9]
SUBAcon: [endoplasmic reticulum,plasma membrane]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.