CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi

Predictor Summary:

plastid 3
mitochondrion 4
golgi 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH06938	Soybean	endoplasmic reticulum, plasma membrane, vacuole	85.71	89.19
KRH58773	Soybean	endoplasmic reticulum, plasma membrane, vacuole	47.4	52.71
KRH31488	Soybean	endoplasmic reticulum, golgi	48.38	52.46
KRH42675	Soybean	endoplasmic reticulum	47.73	51.4
GSMUA_Achr3P19550_001	Banana	mitochondrion	45.13	48.43
GSMUA_Achr9P01430_001	Banana	extracellular	44.81	47.92
KRG97408	Soybean	plastid	49.68	47.81
HORVU3Hr1G108120.1	Barley	extracellular, plasma membrane, vacuole	41.88	44.18
TraesCS2B01G398500.1	Wheat	extracellular	42.21	44.07
TraesCS2D01G377700.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	41.88	43.73
TraesCS3D01G492500.1	Wheat	extracellular	41.23	43.49
TraesCS2A01G381200.1	Wheat	extracellular	41.56	43.39
TraesCS3B01G545900.1	Wheat	extracellular	41.23	43.34
KRH50678	Soybean	cytosol	9.74	42.25
Zm00001d007327_P001	Maize	plasma membrane	41.88	42.02
Os11t0490100-01	Rice	plasma membrane	40.58	41.39
KRH06044	Soybean	endoplasmic reticulum, golgi, vacuole	35.06	38.57
HORVU2Hr1G089430.1	Barley	endoplasmic reticulum, peroxisome, plastid	42.21	38.24
KRH64803	Soybean	golgi, plasma membrane	35.39	35.62
KRH50677	Soybean	mitochondrion	11.36	31.82
KRH50341	Soybean	golgi, plastid	31.49	31.19
KRH28432	Soybean	mitochondrion	31.17	31.17
KRH57814	Soybean	mitochondrion	31.82	31.01
KRH77040	Soybean	mitochondrion	30.19	30.59
KRH04549	Soybean	plastid	31.17	30.48
KRH70689	Soybean	plastid	31.17	29.72
KRH57238	Soybean	golgi	26.95	28.42
KRH63768	Soybean	plastid	25.32	26.71
KRH54181	Soybean	plastid	26.3	26.64
KRH03967	Soybean	vacuole	27.92	25.98

Protein Annotations

EMBL:ACUP02011974	EnsemblPlants:KRG94533	EnsemblPlantsGene:GLYMA_19G091600	EntrezGene:100791438	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0045492	InterPro:IRX15/IRX15L/IGXM	InterPro:Polysacc_synth_dom
PANTHER:PTHR31444	PANTHER:PTHR31444:SF1	PFAM:PF04669	ProteinID:KRG94533	ProteinID:KRG94533.1	SEG:seg
TIGRFAMs:TIGR01627	TMHMM:TMhelix	UniParc:UPI000233E451	UniProt:K7MXF6	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr19:-:32424693..32425619

Molecular Weight (calculated)

34624.0 Da

IEP (calculated)

9.847

GRAVY (calculated)

-0.060

Length

308 amino acids

Sequence
(BLAST)

001: MQPWVFKSFQ PSSQRKKHPP TSNPRLLPLL AATLAATIFL LFLFRQTLLD PTTSADLCVS SSSVVPLTPS EAAIAAEFDT SPLTLVTILH YATARVLPQQ
101: TKGEIRRSFD VLQSLAPCNF LVFGLGHDSL MWDSFNPRGT TLFLEEDPKW TLSALQRFPI LRAHTVRYST RLTESKTLLS SYKDNCARVS VTTGHPLKGN
201: RLCKLALHNL PNEVYDRDWD VIMIDGPRGY FAAAPGRMAV IYSTAMMARG RKRSGVTHVF LHDVDREVEK QYAKEFLCMK YRVGGIRKLW HFVIPPVVNA
301: SDIAHGFC

Best Arabidopsis Sequence Match ( AT1G27930.1 )
(BLAST)

001: MNTLIPSEKR WIITGVLLAG LVGGALLFTS FIRAADETLF LCSTASAKSR AVAAAADYEA TPIQLQAIVH YATSNVVPQQ NLAEISISFN ILKKLAPANF
101: LVFGLGRDSL MWASLNPRGK TLFLEEDLEW FQKVTKDSPF LRAHHVRYRT QLQQADSLLR SYKTEPKCFP AKSYLRGNEK CKLALTGLPD EFYDTEWDLL
201: MVDAPKGYFA EAPGRMAAIF SAAVMARNRK KPGVTHVFLH DVNRRVEKTF AEEFLCRKYR VNAAGRLWHF AIPPAAANAT IDSGDYRFC

Arabidopsis Description

Probable methyltransferase At1g27930 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7F9]
SUBAcon: [endoplasmic reticulum,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.