Factsheet for Zm00001d027968_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid, mitochondrion

Predictor Summary:

mitochondrion 2
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028737_P001	Maize	golgi	43.55	79.88
Zm00001d041782_P001	Maize	plasma membrane	53.55	55.7
Zm00001d023950_P001	Maize	mitochondrion	45.48	45.63
EES16857	Sorghum	mitochondrion	44.52	45.54
HORVU5Hr1G080580.1	Barley	endoplasmic reticulum, mitochondrion, plastid	39.68	41.0
TraesCS5D01G319700.1	Wheat	mitochondrion	39.35	40.94
TraesCS7B01G485000.1	Wheat	mitochondrion, plastid	39.35	40.53
TraesCS5A01G313000.1	Wheat	mitochondrion	39.03	40.47
TraesCS7A01G560100.1	Wheat	mitochondrion, plastid	39.35	40.4
TraesCS7D01G549800.1	Wheat	mitochondrion, plastid	39.68	40.2
TraesCS5B01G313900.1	Wheat	golgi, unclear	38.39	39.67
HORVU7Hr1G120340.1	Barley	plastid	44.19	38.38
Os12t0204500-01	Rice	endoplasmic reticulum, golgi	36.45	38.31
Zm00001d007269_P001	Maize	mitochondrion, plastid	28.71	27.22
Zm00001d007327_P001	Maize	plasma membrane	23.87	24.1
Zm00001d014532_P001	Maize	plasma membrane	21.61	20.87
Zm00001d015307_P001	Maize	golgi, mitochondrion, plastid	20.0	19.2
Zm00001d002066_P001	Maize	plasma membrane	19.68	18.21
Zm00001d001763_P001	Maize	plasma membrane	13.23	14.59
Zm00001d003239_P001	Maize	cytosol	4.19	7.78

Protein Annotations

MapMan:35.1	UniProt:A0A1D6JR13	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0032259	GO:GO:0045492	InterPro:IRX15/IRX15L/IGXM	ProteinID:ONL94396.1
PFAM:PF04669	PANTHER:PTHR31444	PANTHER:PTHR31444:SF2	InterPro:Polysacc_synth_dom	TMHMM:TMhelix	UniParc:UPI00084592F1
EnsemblPlantsGene:Zm00001d027968	EnsemblPlants:Zm00001d027968_P001	EnsemblPlants:Zm00001d027968_T001	SEG:seg	:	:

Description

Glucuronoxylan 4-O-methyltransferase 2

Coordinates

chr1:+:18526350..18531383

Molecular Weight (calculated)

34217.4 Da

IEP (calculated)

10.379

GRAVY (calculated)

-0.244

Length

310 amino acids

Sequence
(BLAST)

001: MDSCMQALRH RHPSRQRLSD AHEPQPAATV LWWLKLKSVL TKVTAKPQSR RQSASSMNEI TWPCARCVPS KQAVSANCNA LAPCRCLCRY GDDAGARPLE
101: RRLHVVDEVV AEDATVLHRR LLRQGPTHAR KDVHLASLRA RLAQQGKAGV ALRLLLAAAL AGFLLVFAAR TLVTSPVPSS PSCLLEPQPL VHYATSNATP
201: QQTAEEIRVA LRVLQRRTPC NFLVFGLGLD SPMWAALNHG GRTVFLEEDA AWIGSVRGRH PALESHHVAY DTALADADAL LGLRTHPACV AQPDRRGVRR
301: ERREPRRVCE

Best Arabidopsis Sequence Match ( AT1G33800.1 )
(BLAST)

001: MRTKSPSSLN LKVIFIGSSI LILIIIYLAR SNISSSSSKP ISKTNLSQEE EETQHKQEGC PTTQQCTKMP LSLSDALVHY VTSNVTPQQT FDEVSVSKRV
101: LDKKSPCNFL VFGLGHDSLM WASLNHGGRT LFIEEDQAWI AIVTKKFPNL ESYHVVYDTK VKDSDKLMEL GRSEECRSVS DPRNSKCDLA LKDFPADFYE
201: TKWDLIMVDA PTGYHEEAPG RMSAIYTAGL LARNREDGET DVFVHDVNRP VEDEFSATFL CKGYMREQNG RLRHFTIPSH RARAGRPFCP VEVDRRR

Arabidopsis Description

GXM3GXMT1 [Source:UniProtKB/TrEMBL;Acc:A0A178W7W0]
SUBAcon: [golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.