Factsheet for Os04t0649900-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 3
endoplasmic reticulum 2
nucleus 1
extracellular 1
vacuole 1
plasma membrane 1
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G113560.1	Barley	golgi, plasma membrane	77.04	81.4
TraesCS2D01G513800.1	Wheat	golgi, plastid	80.82	81.33
TraesCS2B01G540300.1	Wheat	golgi	79.25	79.75
TraesCS2A01G512400.1	Wheat	golgi	79.25	79.75
KXG27192	Sorghum	golgi, mitochondrion, plastid	79.25	77.06
Zm00001d002066_P001	Maize	plasma membrane	79.25	75.22
Os06t0687600-00	Rice	golgi	54.4	51.49
VIT_03s0063g00030.t01	Wine grape	plastid	34.28	49.55
GSMUA_Achr9P25260_001	Banana	golgi	50.94	49.39
GSMUA_Achr6P29610_001	Banana	endoplasmic reticulum, golgi, plastid	50.63	49.39
GSMUA_Achr10P...	Banana	extracellular, plasma membrane, plastid	43.4	47.92
GSMUA_Achr8P03360_001	Banana	golgi	49.06	47.56
KRH50341	Soybean	golgi, plastid	43.71	44.69
VIT_07s0031g00110.t01	Wine grape	golgi	43.08	44.19
PGSC0003DMT400065494	Potato	golgi, plasma membrane, plastid	41.82	44.04
PGSC0003DMT400066571	Potato	endoplasmic reticulum, golgi, mitochondrion, plastid	42.77	43.31
KRH77040	Soybean	mitochondrion	41.2	43.09
KRH28432	Soybean	mitochondrion	41.51	42.86
Solyc02g093090.1.1	Tomato	extracellular, nucleus	41.2	42.53
Os02t0158500-00	Rice	plastid	52.2	42.35
PGSC0003DMT400064322	Potato	plastid	40.88	42.21
Solyc01g107800.2.1	Tomato	endoplasmic reticulum, golgi, mitochondrion, plastid	41.2	41.72
AT5G67210.1	Thale cress	endoplasmic reticulum, golgi, mitochondrion, plastid	41.2	41.32
Bra012143.1-P	Field mustard	plastid	40.88	41.27
CDY12819	Canola	golgi, mitochondrion, plasma membrane, plastid	40.88	41.27
CDX81329	Canola	plastid	39.94	41.23
KRH70689	Soybean	plastid	41.82	41.18
CDY01429	Canola	golgi, mitochondrion, plasma membrane, plastid	40.57	40.95
KRH57814	Soybean	mitochondrion	40.25	40.51
KRH04549	Soybean	plastid	39.94	40.32
CDY37228	Canola	plastid	40.88	40.25
Bra039840.1-P	Field mustard	plastid	40.88	40.0
Bra013107.1-P	Field mustard	plastid	41.2	39.94
CDY13145	Canola	plastid	40.88	39.63
CDY62313	Canola	plastid	39.62	39.38
Bra036059.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	39.94	39.2
CDX89660	Canola	plastid	40.57	38.97
AT2G15440.1	Thale cress	plastid	40.25	38.91
CDY17753	Canola	endoplasmic reticulum, golgi	39.62	38.89
CDY30600	Canola	endoplasmic reticulum, golgi	39.62	38.89
AT3G50220.1	Thale cress	endoplasmic reticulum, golgi	39.31	38.82
Os12t0204500-01	Rice	endoplasmic reticulum, golgi	33.33	35.93
Os11t0242600-00	Rice	mitochondrion	30.5	30.7
Os11t0490100-01	Rice	plasma membrane	27.99	29.47
Os11t0488500-01	Rice	cytosol, nucleus	13.21	12.92

Protein Annotations

MapMan:35.1	EntrezGene:4337222	EMBL:AK061488	ProteinID:BAF16000.1	ProteinID:BAS91349.1	ProteinID:CAE04497.1
ProteinID:EAZ32219.1	GO:GO:0005575	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0045492	InterPro:IRX15/IRX15L/IGXM	EnsemblPlantsGene:Os04g0649900
EnsemblPlants:Os04t0649900-01	PFAM:PF04669	PANTHER:PTHR31444	PANTHER:PTHR31444:SF3	InterPro:Polysacc_synth_dom	UniProt:Q7XMQ4
TIGRFAMs:TIGR01627	TMHMM:TMhelix	UniParc:UPI00001B17E1	RefSeq:XP_015633597.1	SEG:seg	:

Description

Protein of unknown function DUF579, plant family protein. (Os04t0649900-01)

Coordinates

chr4:+:33118368..33119696

Molecular Weight (calculated)

33876.8 Da

IEP (calculated)

6.596

GRAVY (calculated)

-0.047

Length

318 amino acids

Sequence
(BLAST)

001: MKSHGSRDKL QAAASSSHRR VLLLLFATCF ALATFVTFVY NTSHFASASG SGAAADSSGG GASAGSGTGA VSALPLPVFD ALVHFASISN ATHRMSDTDI
101: RAISAVLRAR GPCNLLVFGL GAESPLWLAL NHGGRTVFLE ENEFYVKYLE PRHPGLEAYD VSYTTKVRDF RDLLDAARAS RAAECRPIQN LLFSECRLAI
201: NDLPNDLYDV AWDIVLIDGP SGWNPTSPGR MPSIFTTAVL ARTGATAAKG PTDVLVHDFQ FELEQVLSKE FLCDENRVAG SGTPSLGHFV VRPDGRRDAF
301: CSGQDSTAAG TSSEKSGK

Best Arabidopsis Sequence Match ( AT5G67210.1 )
(BLAST)

001: MKSGGNTNTK LILVHPYIQK QTSTNRLWLL AFVSFFTIAF LLTLLYTTDS IISSKNNSAT VSSAVNSAVT TATISQLPTT AINAMLHYAS RSNDSYHMSY
101: GEMKSISDVL RRCSPPCNLL VFGLTHETLL WKSLNHNGRT VFIEENRYYA AYFEEIHPEI EVFDVQYTTK AREARELVSA VKEAARNECR PVQNLLFSDC
201: KLGLNDLPNH VYDVDWDVIL VDGPRGDGGD VPGRMSSIFT AAVLARSKKG GNPKTHVFVH DYYRDVERLC GDEFLCRENL VESNDLLAHY VLEKMDKNST
301: QFCRGRKKKR SVSSPSA

Arabidopsis Description

IRX15-LIRX15-L [Source:UniProtKB/TrEMBL;Acc:A0A178UEM8]
SUBAcon: [mitochondrion,endoplasmic reticulum,golgi,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.