Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- plastid 3
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 5
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31075 | Canola | endoplasmic reticulum, golgi, plasma membrane | 98.22 | 98.22 |
| AT1G09610.1 | Thale cress | endoplasmic reticulum, golgi | 89.68 | 89.36 |
| Solyc01g103360.2.1 | Tomato | plasma membrane | 71.17 | 72.73 |
| PGSC0003DMT400064018 | Potato | plasma membrane | 70.11 | 71.38 |
| VIT_12s0035g01340.t01 | Wine grape | golgi | 69.75 | 69.01 |
| VIT_12s0035g01170.t01 | Wine grape | endoplasmic reticulum, golgi, vacuole | 69.75 | 67.59 |
| KRH06044 | Soybean | endoplasmic reticulum, golgi, vacuole | 67.26 | 67.5 |
| KRH50678 | Soybean | cytosol | 15.66 | 61.97 |
| GSMUA_Achr8P29140_001 | Banana | endoplasmic reticulum, golgi | 57.65 | 58.06 |
| Bra034460.1-P | Field mustard | golgi, plasma membrane, vacuole | 60.85 | 57.58 |
| Bra028013.1-P | Field mustard | golgi | 59.79 | 56.76 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, golgi | 50.53 | 56.35 |
| Bra016131.1-P | Field mustard | endoplasmic reticulum, extracellular | 55.16 | 52.36 |
| HORVU5Hr1G080580.1 | Barley | endoplasmic reticulum, mitochondrion, plastid | 54.45 | 51.0 |
| TraesCS5D01G319700.1 | Wheat | mitochondrion | 53.38 | 50.34 |
| TraesCS5B01G313900.1 | Wheat | golgi, unclear | 53.74 | 50.33 |
| TraesCS5A01G313000.1 | Wheat | mitochondrion | 53.02 | 49.83 |
| Os12t0204500-01 | Rice | endoplasmic reticulum, golgi | 51.96 | 49.49 |
| TraesCS7A01G560100.1 | Wheat | mitochondrion, plastid | 52.67 | 49.01 |
| TraesCS7B01G485000.1 | Wheat | mitochondrion, plastid | 52.31 | 48.84 |
| EES16857 | Sorghum | mitochondrion | 52.31 | 48.51 |
| TraesCS7D01G549800.1 | Wheat | mitochondrion, plastid | 52.31 | 48.04 |
| KRH50677 | Soybean | mitochondrion | 16.37 | 41.82 |
| HORVU7Hr1G120340.1 | Barley | plastid | 52.67 | 41.46 |
| Bra034005.1-P | Field mustard | endoplasmic reticulum, golgi | 42.35 | 41.32 |
| TraesCS4A01G227100.1 | Wheat | mitochondrion | 46.62 | 40.43 |
| Bra030066.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 41.28 | 40.14 |
| TraesCS4B01G089200.1 | Wheat | mitochondrion | 45.91 | 39.94 |
| Bra004093.1-P | Field mustard | endoplasmic reticulum, golgi | 41.28 | 39.86 |
| TraesCS4D01G086700.1 | Wheat | mitochondrion | 45.91 | 39.57 |
| Bra032854.1-P | Field mustard | endoplasmic reticulum | 40.57 | 39.45 |
| HORVU4Hr1G015310.3 | Barley | endoplasmic reticulum, plastid | 46.26 | 36.72 |
| Os11t0242600-00 | Rice | mitochondrion | 39.5 | 35.13 |
| Bra013845.1-P | Field mustard | cytosol | 22.06 | 34.64 |
| EES08266 | Sorghum | mitochondrion | 39.86 | 34.15 |
| Zm00001d003239_P001 | Maize | cytosol | 18.15 | 30.54 |
| Bra039840.1-P | Field mustard | plastid | 33.1 | 28.62 |
| Bra012143.1-P | Field mustard | plastid | 32.03 | 28.57 |
| Bra036059.1-P | Field mustard | endoplasmic reticulum, golgi, plastid | 32.03 | 27.78 |
| Bra013107.1-P | Field mustard | plastid | 32.38 | 27.74 |
| Bra019203.1-P | Field mustard | plastid | 28.83 | 25.96 |
Protein Annotations
| MapMan:21.2.2.2.3 | EnsemblPlantsGene:Bra030789 | EnsemblPlants:Bra030789.1 | EnsemblPlants:Bra030789.1-P | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005975 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0030775 |
| GO:GO:0032259 | GO:GO:0045491 | GO:GO:0045492 | InterPro:IRX15/IRX15L/IGXM | UniProt:M4EPR8 | PFAM:PF04669 |
| PANTHER:PTHR31444 | PANTHER:PTHR31444:SF4 | InterPro:Polysacc_synth_dom | TIGRFAMs:TIGR01627 | TMHMM:TMhelix | UniParc:UPI00025467BF |
| SEG:seg | : | : | : | : | : |
Description
AT1G09610 (E=8e-139) | unknown protein
Coordinates
chrA08:-:20363924..20364769
Molecular Weight (calculated)
31828.3 Da
IEP (calculated)
7.730
GRAVY (calculated)
-0.323
Length
281 amino acids
Sequence
(BLAST)
(BLAST)
001: MRTRTSQTQE LKLLLICLFA ALVLIFIVRS TLTTSQQHQT PEETTRSKGC AGACNKLPRS LAQALIHYST SVITPQQTLK EIAVSSRVLE KKSPCNFLVF
101: GLGHDSLMWS SLNYGGRTVF LEEDEAWIKQ IKRRFPMLES YHVTYDSKVN QAENLIEVGK GPECTAVGDP RYSMCQLALK GLPAEIYETS WDLIMVDAPT
201: GYYDEAPGRM TAIYTAGMMA RNRERVGETD VFVHDVNREV EDKFSKAFLC EGYMKKQEGR LRHFVIPSYR DGSESNRPFC P
101: GLGHDSLMWS SLNYGGRTVF LEEDEAWIKQ IKRRFPMLES YHVTYDSKVN QAENLIEVGK GPECTAVGDP RYSMCQLALK GLPAEIYETS WDLIMVDAPT
201: GYYDEAPGRM TAIYTAGMMA RNRERVGETD VFVHDVNREV EDKFSKAFLC EGYMKKQEGR LRHFVIPSYR DGSESNRPFC P
001: MRPKANQNHK LKVLLVFLLA TLILIFIVRS TLTSSQEHQT PQETRSTRCS GACNKLPRSL AQALIHYSTS VITPQQTLKE IAVSSRVLGK KSPCNFLVFG
101: LGHDSLMWSS LNYGGRTVFL EEDEAWIKQI KRRFPMLESY HVTYDSKVNQ ADNLIEVGKG PECTAIGDPR YSMCQLALKG LPAEIYETGW DLIMVDAPTG
201: YYDEAPGRMT AIYTAGMMAR NRKQGGETDV FVHDVNREIE DKFSKAFLCE GYMKKQEGRL RHFIIPSYRD GSESESNRPF CP
101: LGHDSLMWSS LNYGGRTVFL EEDEAWIKQI KRRFPMLESY HVTYDSKVNQ ADNLIEVGKG PECTAIGDPR YSMCQLALKG LPAEIYETGW DLIMVDAPTG
201: YYDEAPGRMT AIYTAGMMAR NRKQGGETDV FVHDVNREIE DKFSKAFLCE GYMKKQEGRL RHFIIPSYRD GSESESNRPF CP
Arabidopsis Description
GXM1GXM3 [Source:UniProtKB/TrEMBL;Acc:A0A178W7U8]
SUBAcon: [endoplasmic reticulum,golgi]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.