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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • plastid 4
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular
Any Predictor:nucleus, plastid, secretory
BaCelLo:plastid
ChloroP:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:nucleus, plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX96332 Canola endoplasmic reticulum, extracellular 99.66 99.66
AT1G71690.1 Thale cress endoplasmic reticulum, golgi, plastid 78.38 78.64
Bra028013.1-P Field mustard golgi 56.42 56.42
Bra034460.1-P Field mustard golgi, plasma membrane, vacuole 55.74 55.56
GSMUA_Achr8P29140_001 Banana endoplasmic reticulum, golgi 52.03 55.2
Bra030789.1-P Field mustard endoplasmic reticulum, golgi 52.36 55.16
VIT_00s0238g00020.t01 Wine grape extracellular, plasma membrane 55.74 55.0
Solyc11g031950.1.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 54.39 54.76
GSMUA_Achr10P... Banana endoplasmic reticulum, golgi 45.61 53.57
KRH64803 Soybean golgi, plasma membrane 55.07 53.27
PGSC0003DMT400080082 Potato endoplasmic reticulum, golgi 54.73 52.6
TraesCS5A01G313000.1 Wheat mitochondrion 51.35 50.84
TraesCS5D01G319700.1 Wheat mitochondrion 50.68 50.34
TraesCS5B01G313900.1 Wheat golgi, unclear 50.68 50.0
TraesCS7A01G560100.1 Wheat mitochondrion, plastid 51.01 50.0
HORVU5Hr1G080580.1 Barley endoplasmic reticulum, mitochondrion, plastid 50.68 50.0
VIT_00s0238g00030.t01 Wine grape extracellular, plasma membrane 40.88 50.0
TraesCS7B01G485000.1 Wheat mitochondrion, plastid 50.68 49.83
TraesCS7D01G549800.1 Wheat mitochondrion, plastid 51.01 49.35
Solyc06g064800.1.1 Tomato extracellular, golgi 43.58 48.86
Os12t0204500-01 Rice endoplasmic reticulum, golgi 47.97 48.14
EES16857 Sorghum mitochondrion 48.65 47.52
HORVU7Hr1G120340.1 Barley plastid 50.68 42.02
TraesCS4B01G089200.1 Wheat mitochondrion 45.27 41.49
TraesCS4A01G227100.1 Wheat mitochondrion 44.93 41.05
TraesCS4D01G086700.1 Wheat mitochondrion 44.59 40.49
Bra034005.1-P Field mustard endoplasmic reticulum, golgi 37.16 38.19
Bra032854.1-P Field mustard endoplasmic reticulum 37.16 38.06
Bra004093.1-P Field mustard endoplasmic reticulum, golgi 37.16 37.8
Bra030066.1-P Field mustard endoplasmic reticulum, plasma membrane 36.82 37.72
HORVU4Hr1G015310.3 Barley endoplasmic reticulum, plastid 43.58 36.44
Os11t0242600-00 Rice mitochondrion 37.84 35.44
EES08266 Sorghum mitochondrion 38.51 34.76
Bra013845.1-P Field mustard cytosol 20.27 33.52
Bra012143.1-P Field mustard plastid 34.46 32.38
Bra013107.1-P Field mustard plastid 34.46 31.1
Bra039840.1-P Field mustard plastid 33.78 30.77
Bra036059.1-P Field mustard endoplasmic reticulum, golgi, plastid 32.77 29.94
Bra019203.1-P Field mustard plastid 25.34 24.04
Protein Annotations
EnsemblPlants:Bra016131.1EnsemblPlants:Bra016131.1-PEnsemblPlantsGene:Bra016131GO:GO:0005575GO:GO:0005975GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0045492
InterPro:IRX15/IRX15L/IGXMInterPro:Polysacc_synth_domPANTHER:PTHR31444PANTHER:PTHR31444:SF18PFAM:PF04669SEG:seg
TIGRFAMs:TIGR01627TMHMM:TMhelixUniParc:UPI0002541AE9UniProt:M4DI04MapMan:21.2.2.2.3:
Description
AT1G71690 (E=2e-120) | unknown protein
Coordinates
chrA07:+:19269970..19271009
Molecular Weight (calculated)
33092.5 Da
IEP (calculated)
6.785
GRAVY (calculated)
-0.203
Length
296 amino acids
Sequence
(BLAST)
001: MTTNLHFPIT LKLILSTLAS LLVITLFFIT RTDFSPSSYQ PAPAKTIQIS SSSTRTKVQS QNSVSCGKIP PSLADALIHY AASNVTPQQT LSEISVTKKV
101: LDKTSPCNFL VFGLGHDSLM WASLNHGGRT IFLDEDESWI RRIAEKFPSL ESYHVRYETK VRDAAALMSA ARDREECRLG ASMDLRVSKC ELALKGLPEV
201: VYEREWDLIM VDAPTGFHED APGRMSAIYT AGMLARSRKN GENTAVFVHD VDRTVEDEFS MAFLCRDYMT EQEGRLRHFT VPSHWDSNIA GGKYCP
Best Arabidopsis Sequence Match ( AT1G71690.1 )
(BLAST)
001: MTTYLPFPMT TRLILSSFVS LVVLTLFFIT RTGFSPSSSF HQPLNNTLRI STSSTGSKLQ SPRSCNKIPP SLADALVHYA SSNVTPQQTL SEISVTKKEL
101: EKKSPCNFLV FGLGHDSLMW ATLNHGGRTI FLDEDESWIH QIAEKFPSLE SYHVRYKTKV RDAEALMAAT KDREECRRVS TDLRVSTCEL ALKGLPEVVY
201: ETEWDLIMVD APTGFHEEAP GRMSAIYTAG MIARRRKDEE ETTAVFVHDV DRKVEDEFSM EFLCRDYMTK QEGRLRHFTV PSHRNYGVSG VKFCP
Arabidopsis Description
At1g71690 [Source:UniProtKB/TrEMBL;Acc:Q9C9J1]
SUBAcon: [endoplasmic reticulum,golgi,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.