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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:
  • plastid 2
  • extracellular 4
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 4
  • golgi 5
  • nucleus 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi
Any Predictor:mitochondrion, nucleus, plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:nucleus, plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:mitochondrion
YLoc:golgi
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr10P...
GSMUA_Achr3P04120_001
GSMUA_Achr4P01630_001
GSMUA_Achr4P08270_001
GSMUA_Achr4P15460_001
GSMUA_Achr6P14800_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G33800.1 GSMUA_Achr4P08270_001 AT3G16310.1 21798944
AT1G33800.1 GSMUA_Achr4P15460_001 AT3G16310.1 21798944
AT1G33800.1 GSMUA_Achr6P14800_001 AT3G16310.1 21798944
AT1G33800.1 GSMUA_Achr10P... AT4G26455.1 21798944
AT1G33800.1 GSMUA_Achr3P04120_001 AT4G26455.1 21798944
AT1G33800.1 GSMUA_Achr4P01630_001 AT4G26455.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr10P... Banana endoplasmic reticulum, golgi 56.99 63.1
KRH50678 Soybean cytosol 15.77 61.97
Solyc01g103360.2.1 Tomato plasma membrane 57.71 58.55
VIT_12s0035g01340.t01 Wine grape golgi 59.14 58.1
Bra030789.1-P Field mustard endoplasmic reticulum, golgi 58.06 57.65
AT1G09610.1 Thale cress endoplasmic reticulum, golgi 58.06 57.45
CDY20685 Canola endoplasmic reticulum, golgi, plasma membrane 57.71 57.3
PGSC0003DMT400064018 Potato plasma membrane 56.63 57.25
VIT_12s0035g01170.t01 Wine grape endoplasmic reticulum, golgi, vacuole 59.14 56.9
VIT_00s0238g00020.t01 Wine grape extracellular, plasma membrane 60.93 56.67
CDY31075 Canola endoplasmic reticulum, golgi, plasma membrane 56.99 56.58
KRH06044 Soybean endoplasmic reticulum, golgi, vacuole 55.91 55.71
Solyc06g064800.1.1 Tomato extracellular, golgi 52.33 55.3
Solyc11g031950.1.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 58.06 55.1
Bra028013.1-P Field mustard golgi 58.06 54.73
CDX93751 Canola golgi 58.06 54.73
CDY15292 Canola golgi 58.06 54.73
CDY48797 Canola golgi, plasma membrane 57.71 54.21
TraesCS5D01G319700.1 Wheat mitochondrion 57.71 54.03
AT1G33800.1 Thale cress golgi, plasma membrane 57.35 53.87
Bra034460.1-P Field mustard golgi, plasma membrane, vacuole 57.35 53.87
TraesCS5A01G313000.1 Wheat mitochondrion 57.35 53.51
TraesCS7B01G485000.1 Wheat mitochondrion, plastid 57.71 53.49
AT4G09990.1 Thale cress golgi 55.56 53.45
TraesCS5B01G313900.1 Wheat golgi, unclear 57.35 53.33
TraesCS7A01G560100.1 Wheat mitochondrion, plastid 57.71 53.31
AT1G71690.1 Thale cress endoplasmic reticulum, golgi, plastid 56.27 53.22
HORVU5Hr1G080580.1 Barley endoplasmic reticulum, mitochondrion, plastid 56.63 52.67
TraesCS7D01G549800.1 Wheat mitochondrion, plastid 57.71 52.61
PGSC0003DMT400080082 Potato endoplasmic reticulum, golgi 57.71 52.27
Bra016131.1-P Field mustard endoplasmic reticulum, extracellular 55.2 52.03
CDX96332 Canola endoplasmic reticulum, extracellular 55.2 52.03
Os12t0204500-01 Rice endoplasmic reticulum, golgi 54.84 51.86
EES16857 Sorghum mitochondrion 55.91 51.49
KRH64803 Soybean golgi, plasma membrane 55.91 50.98
CDX72815 Canola endoplasmic reticulum, extracellular 53.76 49.83
VIT_00s0238g00030.t01 Wine grape extracellular, plasma membrane 42.29 48.76
CDY37946 Canola extracellular 43.73 46.04
HORVU7Hr1G120340.1 Barley plastid 56.63 44.26
GSMUA_Achr3P19550_001 Banana mitochondrion 45.16 43.9
KRH50677 Soybean mitochondrion 17.2 43.64
TraesCS4B01G089200.1 Wheat mitochondrion 50.18 43.34
TraesCS4A01G227100.1 Wheat mitochondrion 50.18 43.21
TraesCS4D01G086700.1 Wheat mitochondrion 50.18 42.94
GSMUA_Achr9P01430_001 Banana extracellular 42.29 40.97
HORVU4Hr1G015310.3 Barley endoplasmic reticulum, plastid 50.18 39.55
Os11t0242600-00 Rice mitochondrion 44.44 39.24
EES08266 Sorghum mitochondrion 45.88 39.02
GSMUA_Achr10P... Banana endoplasmic reticulum, extracellular, golgi 31.54 34.24
GSMUA_Achr6P29610_001 Banana endoplasmic reticulum, golgi, plastid 38.71 33.13
Zm00001d003239_P001 Maize cytosol 19.35 32.34
GSMUA_Achr9P25260_001 Banana golgi 37.28 31.71
GSMUA_Achr8P03360_001 Banana golgi 36.92 31.4
GSMUA_Achr10P... Banana extracellular, plasma membrane, plastid 31.54 30.56
GSMUA_Achr9P01440_001 Banana golgi 27.96 29.77
Protein Annotations
EnsemblPlants:GSMUA_Achr8P29140_001EnsemblPlants:GSMUA_Achr8T29140_001EnsemblPlantsGene:GSMUA_Achr8G29140_001GO:GO:0005975GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009987GO:GO:0045492InterPro:IRX15/IRX15L/IGXMInterPro:Polysacc_synth_domPANTHER:PTHR31444
PANTHER:PTHR31444:SF2PFAM:PF04669SEG:segTIGRFAMs:TIGR01627TMHMM:TMhelixUniParc:UPI0002967534
UniProt:M0TUL7MapMan:21.2.2.2.3::::
Description
plant-specific domain TIGR01627 family protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G29140_001]
Coordinates
chr8:-:31659563..31660488
Molecular Weight (calculated)
30982.2 Da
IEP (calculated)
8.054
GRAVY (calculated)
-0.158
Length
279 amino acids
Sequence
(BLAST)
001: MKPKSPKTFK PKLLLLGFCL AFLLLLLFLL LTAGRSFSPP SLTASASANT PACTKLPPSL AKTIVHYTTS NITPQQTLRE ISVTAKVLER KSPCNFLVFG
101: LGYDSPMWSA LNHGGRTIFL EEDESWIKSM TRKFPELEAY HVKYDTRVSQ ADELLELRRS SSCTTAAAAD TRSSGCRLAL TELPDEFYGV EWDLIMVDAP
201: TGYVAKAPGR MSAIYTAGMA ARGRSEGETD VFVHDVDRAV EDRFSTTFLC EGYMKEQEGR LRHFTIPSHR ANPSFSFCP
Best Arabidopsis Sequence Match ( AT1G33800.1 )
(BLAST)
001: MRTKSPSSLN LKVIFIGSSI LILIIIYLAR SNISSSSSKP ISKTNLSQEE EETQHKQEGC PTTQQCTKMP LSLSDALVHY VTSNVTPQQT FDEVSVSKRV
101: LDKKSPCNFL VFGLGHDSLM WASLNHGGRT LFIEEDQAWI AIVTKKFPNL ESYHVVYDTK VKDSDKLMEL GRSEECRSVS DPRNSKCDLA LKDFPADFYE
201: TKWDLIMVDA PTGYHEEAPG RMSAIYTAGL LARNREDGET DVFVHDVNRP VEDEFSATFL CKGYMREQNG RLRHFTIPSH RARAGRPFCP VEVDRRR
Arabidopsis Description
GXM3GXMT1 [Source:UniProtKB/TrEMBL;Acc:A0A178W7W0]
SUBAcon: [plasma membrane,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.